Gene CPR_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0538 
Symbol 
ID4206207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp636725 
End bp638476 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content25% 
IMG OID642565095 
Productsensor histidine kinase 
Protein accessionYP_697866 
Protein GI110803723 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAAAA TAATAAGGAA AGTTATAAAT ACCTTAAGAG GAATATCAAA TTTTCTTAGA 
AAAACTTCTA TTAAAAATAG ACTTATAGCA TCATTTTCTG TAGGAATAAT TTTTTGTAGT
AGTATTTTAG GCATACTCCT ATATAAAAAG GCTACCAATG CACTTAAGAA TAATGTAATA
AATTATTCGA AAAATATGCT TTCTATAATG AGTGAAGATA TTTATAAAAA TAAAGAATTT
TTAGAACGAG CATCTATTGA ATTATCAATG AATGAAGAAA TAGCTAATAA TCTTATAAAC
TACAAATTTA TGGATGGAAA AGAAAAGAAT AAATTTTTAA AATATATGAA TGATTATTTA
TCTAAAAAAC TTTCTCTTTT ACCTAATCTA GCAGAGGTTG AAATAATATC AAAGGATTAT
GAAGTTACTT ATATGCAAGG CTTTAAATAT TTTAAGAGAG AAGATATAGA AAGATATGCA
GATGAATCTG AAAATGGACT ATTTTGGTTT TCTACAATTT TAAATAATGA ATCTCACATA
TGTATAGTAA CTCCAGTAAA ACAGGATAAC AGTATTTTGG GATATGTTTT TATGGCTATA
AAAAGTGAAG TTTTTGCCTC TTCTTTTTCT CTTTTTAATA TTGGTAAAGG TAGTGAAATT
TTTATAATAG ATGATAATAA TAACATAATA ATTTCTGAAA ATAATTTAAA TAGTAATTTT
ATATTAGAGG AGACAAATTT AAATAAGTTC CTTAAAGATA AAGGGGCTAA GGATACAGCA
AGGAGTATAG TGGTAAATGG AGAAAATTAT GTAGCTACAT ATAGAAAATT AAAGGGATTT
AATTGGTATA TAGCTTCAAT GATTCCTTAT GATTTTATAA ATGCTGATAT TCAAAGCTTA
AAAAAAGAGA TGACTATAAT AGGATTACTT TTTACTTTAG TGGTATTAAT ATTTTCATAT
TTTTTATATT CAAGTATTAA AGTACCTTTA TATAACCTTT TAAATAAGAT GAAAAGAGTA
TCTGAGGGGG ATTTGAAGGT TTTGGTAAAT GATACTTATG AAGATGAGAT TGGTGTTATT
TCTGATAATT TTGATTCTAT GTTAAAAAGA GTAAATGAAT TAATTGAAAA GACTAAATTA
CAAGAAGTTG AGAAAAGGGA TTTAGAGATA AGGATGTTAC AGGCACAAAT TAATCCTCAT
TTTCTTTTTA ATACATTGAA CTCTTTAAAG TGGACAGCCT TAATGAATCA AGATTATACA
GTAAGCGAGG GGCTTAGTTC ACTAGCAGAA TTATTAAGAA ATACTATCAT AGATAAAAAT
GAATTTGTAA CTATTAGAGA AGAACTAGAG AATATAAAAA ATTATTTTGT AATTCAAAAG
ATAAGATACG GTAATTCTTT TGATGTTCAG TATGAAGTAG ATGAACTTTT ATTAGAAAAT
AAAGTTATAA AGTTTATTTT ACAACCAATA GTAGAAAATT CAATAATTCA TGGAATTGAT
GAAAATAAGG AAAATCAAAA GATTATTATT AAAATTATGT CAGAGGAAGA AAATATTTTA
ATATCGATTA AGGATAACGG AAAGGGGTTT AATAGTAAAG AAAAGATTAA AGATAATAAA
CTTTCAGGTA TTGGATGGAA TAATGTTGAT GAGAGTATAA AATTAACATT TGGATTGGAT
TATGGGACAA ATATTTATAG TGAGGTGAAT AAAGGAACTA TTGTTAAAAT AGTAATTCCT
AAGAGCATAT AG
 
Protein sequence
MRKIIRKVIN TLRGISNFLR KTSIKNRLIA SFSVGIIFCS SILGILLYKK ATNALKNNVI 
NYSKNMLSIM SEDIYKNKEF LERASIELSM NEEIANNLIN YKFMDGKEKN KFLKYMNDYL
SKKLSLLPNL AEVEIISKDY EVTYMQGFKY FKREDIERYA DESENGLFWF STILNNESHI
CIVTPVKQDN SILGYVFMAI KSEVFASSFS LFNIGKGSEI FIIDDNNNII ISENNLNSNF
ILEETNLNKF LKDKGAKDTA RSIVVNGENY VATYRKLKGF NWYIASMIPY DFINADIQSL
KKEMTIIGLL FTLVVLIFSY FLYSSIKVPL YNLLNKMKRV SEGDLKVLVN DTYEDEIGVI
SDNFDSMLKR VNELIEKTKL QEVEKRDLEI RMLQAQINPH FLFNTLNSLK WTALMNQDYT
VSEGLSSLAE LLRNTIIDKN EFVTIREELE NIKNYFVIQK IRYGNSFDVQ YEVDELLLEN
KVIKFILQPI VENSIIHGID ENKENQKIII KIMSEEENIL ISIKDNGKGF NSKEKIKDNK
LSGIGWNNVD ESIKLTFGLD YGTNIYSEVN KGTIVKIVIP KSI