Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0538 |
Symbol | |
ID | 4206207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 636725 |
End bp | 638476 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565095 |
Product | sensor histidine kinase |
Protein accession | YP_697866 |
Protein GI | 110803723 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAAAAA TAATAAGGAA AGTTATAAAT ACCTTAAGAG GAATATCAAA TTTTCTTAGA AAAACTTCTA TTAAAAATAG ACTTATAGCA TCATTTTCTG TAGGAATAAT TTTTTGTAGT AGTATTTTAG GCATACTCCT ATATAAAAAG GCTACCAATG CACTTAAGAA TAATGTAATA AATTATTCGA AAAATATGCT TTCTATAATG AGTGAAGATA TTTATAAAAA TAAAGAATTT TTAGAACGAG CATCTATTGA ATTATCAATG AATGAAGAAA TAGCTAATAA TCTTATAAAC TACAAATTTA TGGATGGAAA AGAAAAGAAT AAATTTTTAA AATATATGAA TGATTATTTA TCTAAAAAAC TTTCTCTTTT ACCTAATCTA GCAGAGGTTG AAATAATATC AAAGGATTAT GAAGTTACTT ATATGCAAGG CTTTAAATAT TTTAAGAGAG AAGATATAGA AAGATATGCA GATGAATCTG AAAATGGACT ATTTTGGTTT TCTACAATTT TAAATAATGA ATCTCACATA TGTATAGTAA CTCCAGTAAA ACAGGATAAC AGTATTTTGG GATATGTTTT TATGGCTATA AAAAGTGAAG TTTTTGCCTC TTCTTTTTCT CTTTTTAATA TTGGTAAAGG TAGTGAAATT TTTATAATAG ATGATAATAA TAACATAATA ATTTCTGAAA ATAATTTAAA TAGTAATTTT ATATTAGAGG AGACAAATTT AAATAAGTTC CTTAAAGATA AAGGGGCTAA GGATACAGCA AGGAGTATAG TGGTAAATGG AGAAAATTAT GTAGCTACAT ATAGAAAATT AAAGGGATTT AATTGGTATA TAGCTTCAAT GATTCCTTAT GATTTTATAA ATGCTGATAT TCAAAGCTTA AAAAAAGAGA TGACTATAAT AGGATTACTT TTTACTTTAG TGGTATTAAT ATTTTCATAT TTTTTATATT CAAGTATTAA AGTACCTTTA TATAACCTTT TAAATAAGAT GAAAAGAGTA TCTGAGGGGG ATTTGAAGGT TTTGGTAAAT GATACTTATG AAGATGAGAT TGGTGTTATT TCTGATAATT TTGATTCTAT GTTAAAAAGA GTAAATGAAT TAATTGAAAA GACTAAATTA CAAGAAGTTG AGAAAAGGGA TTTAGAGATA AGGATGTTAC AGGCACAAAT TAATCCTCAT TTTCTTTTTA ATACATTGAA CTCTTTAAAG TGGACAGCCT TAATGAATCA AGATTATACA GTAAGCGAGG GGCTTAGTTC ACTAGCAGAA TTATTAAGAA ATACTATCAT AGATAAAAAT GAATTTGTAA CTATTAGAGA AGAACTAGAG AATATAAAAA ATTATTTTGT AATTCAAAAG ATAAGATACG GTAATTCTTT TGATGTTCAG TATGAAGTAG ATGAACTTTT ATTAGAAAAT AAAGTTATAA AGTTTATTTT ACAACCAATA GTAGAAAATT CAATAATTCA TGGAATTGAT GAAAATAAGG AAAATCAAAA GATTATTATT AAAATTATGT CAGAGGAAGA AAATATTTTA ATATCGATTA AGGATAACGG AAAGGGGTTT AATAGTAAAG AAAAGATTAA AGATAATAAA CTTTCAGGTA TTGGATGGAA TAATGTTGAT GAGAGTATAA AATTAACATT TGGATTGGAT TATGGGACAA ATATTTATAG TGAGGTGAAT AAAGGAACTA TTGTTAAAAT AGTAATTCCT AAGAGCATAT AG
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Protein sequence | MRKIIRKVIN TLRGISNFLR KTSIKNRLIA SFSVGIIFCS SILGILLYKK ATNALKNNVI NYSKNMLSIM SEDIYKNKEF LERASIELSM NEEIANNLIN YKFMDGKEKN KFLKYMNDYL SKKLSLLPNL AEVEIISKDY EVTYMQGFKY FKREDIERYA DESENGLFWF STILNNESHI CIVTPVKQDN SILGYVFMAI KSEVFASSFS LFNIGKGSEI FIIDDNNNII ISENNLNSNF ILEETNLNKF LKDKGAKDTA RSIVVNGENY VATYRKLKGF NWYIASMIPY DFINADIQSL KKEMTIIGLL FTLVVLIFSY FLYSSIKVPL YNLLNKMKRV SEGDLKVLVN DTYEDEIGVI SDNFDSMLKR VNELIEKTKL QEVEKRDLEI RMLQAQINPH FLFNTLNSLK WTALMNQDYT VSEGLSSLAE LLRNTIIDKN EFVTIREELE NIKNYFVIQK IRYGNSFDVQ YEVDELLLEN KVIKFILQPI VENSIIHGID ENKENQKIII KIMSEEENIL ISIKDNGKGF NSKEKIKDNK LSGIGWNNVD ESIKLTFGLD YGTNIYSEVN KGTIVKIVIP KSI
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