Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0528 |
Symbol | |
ID | 4205567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 625524 |
End bp | 627710 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565085 |
Product | stage V sporulation protein D |
Protein accession | YP_697856 |
Protein GI | 110802803 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR02214] stage V sporulation protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAGAT CATATAGAGA TATGGCCATA ATAAGAAAAA GACTTTCGTT TATCCTAGCA TTTATTATAA TTATGTGTTT TATACTAAGC ATTAGATTAT CTTATGTAAT GATAATTAAA GGACCTGACT ATGCAGACCT AGCTGTTGAA CAATGGACAA ATGAAGTTAA AATATCTGCA AGAAGAGGAA AAATACTAGA TAGAGATTTA AATGAACTTG CTATTAGTTC TAATGTTTAT AGAATTGATT TAAATCTAAA TGCAATTAGG TCTTATACAA AGAAAACTGG GAAAACTAAT GAAGAATTAG CTTTAGAAAT TTCTAAGGTT CTTGAAATGG ATAAGGATAC AGTTTTAAAA AAAATAGAAT TTAAACTTCC TTCTGGAGCT CCTGCTGGTG CTGCAATCCT TGCTAGAAGA ATAGAAAAGG AGAAAGCAGA TAAAGTTAAG GAATTAGAAA TACCAGGAGT AATGGTTTCT CCAGATACTC AAAGGTATTA TCCTAATGAT AATTTTCTTT CTCATGTACT AGGTACTACT AACTCTGATG GTGTTGGATT AAATGGTATT GAGCTAAAAT ATGATAGAGT TTTATCTGGA AGTCCTGGAT TAAAAATAAC TGAGATGGTT AAGGACGGTG CTGAATATCC TTATACTATT TCTAGATTTA CAGCACCTGT AGATGGCAAA GATGTAGTCT TAACAATTGA TGAAAAATTA CAATACTTTG CTGAACAAAT CGCTGAAATA GGTTTAGTAC ATCATAATGC TGATGCAGCA TCAGTAATAA TAATGAATCC AAACAATGGT GAAATCTTAG CTATGTCTAA CAAACCTGAC TTTAATCCAA ATAAACCTTA TGATGGGGCT GAAAATTTTT CTGGAAATAC TTCCTCAGAT AGAATTCAAA AAATGTGGAG AAATAGATCT GTTTCAGACT CCTTCGAACC GGGTTCTATT TTTAAGATAA TAACAGCTTC CGCCGCAGTC CAAGAAGGGG TAGCTGGTAA GGATGAAACC TATACCTGTA GTGGTGGTCT CCAAAAAGGT GATAGATTCA TTAAATGCTG GAAAAGAGGT GGACATGGCA CTCAAACCTT TGAAGAAATA ATACAAAATT CATGTAACGT TGGATTTATG AATTTAGGAG AAAAATTAGG TGCTGAAAAA TTAAATGAAT ATATAAAAAA ATTTGGTCTT GGTAAAAAAT CTGGTGTAGA TTTACCTGGT GAATCTCCTG GAATAGTTAA GAAAACAGAA AATATAACAG ATATGGACTT AGCAACTATT TCTTTTGGTC AAACTAATAC TGTTAATCCA ATTCAATTCA TGACTGCAGT TAATGCCGTT GCCAATGGTG GCACATTAAT TCAACCCCAT GTTGTTAAAG AAATAAGTTA TATAAACGAA AATAATGATA GAGTTATAGA TGAAACCTTT GTCCCTAAGA AAACAGAAAA TTTAATAAGC AAAGAAACTG CTGATCAAAT AAAATTAGCC CTAGAAAACG CAGTAAAAAA TGGATCAGCA AAAGGAGCTT ATAAAGAAGG ATATGGAGTT GCTGGTAAAA CAGGTACTGC CCAAAAAGTT AATCCTGAAA CCGGTGGATA TGGTGGAGGA TATGTAGCTT CCTTTGTTGG TTTTGCTCCT TATGATAATC CACAAATATC TGTTATGGTA TCTGTTGATA ATCCTAAAAA TGGAGAATAT TATGGTGGTA GAGTTGCAGC ACCTTTAGCT GGAATGCTAT TCCAAAATAT ATTTAACTAT ATAGATTTAA CAGAATTCCA CTTAGATGAA AAACTTCCTG AAAAAGAAAC TATTGTAATT CCTGAAGTTC GTGGATTACC TATAAATGAT GCTACAAGTA TGCTAAAGGA ATTAGGTATA TCTTACGAAA TAGAAGGTGA AGGAGAATTT ATAGTTGAAA GTAATCCTTC TCCTGGCTAT CCAATATCTC CAGATACAAA AATAACCTTA ATAGCCGGTG ATAGTTCAAA CTTAAATAGT GATGTTATAA TTCCAGACTT TAAAAACTAT TCTAAAGAAT CTGCTGAAAA ACTTCTTAAT CAGTTAGGTC TTATAGGAGA ATTTGTTGGT GAAGGTCCAT CTATAACTAA ACAAAGTATT TCACCTGATG AAGTTGTAAA TGGAAATTCA AAAATTACAT TAACCTTAGG ATATTAA
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Protein sequence | MKRSYRDMAI IRKRLSFILA FIIIMCFILS IRLSYVMIIK GPDYADLAVE QWTNEVKISA RRGKILDRDL NELAISSNVY RIDLNLNAIR SYTKKTGKTN EELALEISKV LEMDKDTVLK KIEFKLPSGA PAGAAILARR IEKEKADKVK ELEIPGVMVS PDTQRYYPND NFLSHVLGTT NSDGVGLNGI ELKYDRVLSG SPGLKITEMV KDGAEYPYTI SRFTAPVDGK DVVLTIDEKL QYFAEQIAEI GLVHHNADAA SVIIMNPNNG EILAMSNKPD FNPNKPYDGA ENFSGNTSSD RIQKMWRNRS VSDSFEPGSI FKIITASAAV QEGVAGKDET YTCSGGLQKG DRFIKCWKRG GHGTQTFEEI IQNSCNVGFM NLGEKLGAEK LNEYIKKFGL GKKSGVDLPG ESPGIVKKTE NITDMDLATI SFGQTNTVNP IQFMTAVNAV ANGGTLIQPH VVKEISYINE NNDRVIDETF VPKKTENLIS KETADQIKLA LENAVKNGSA KGAYKEGYGV AGKTGTAQKV NPETGGYGGG YVASFVGFAP YDNPQISVMV SVDNPKNGEY YGGRVAAPLA GMLFQNIFNY IDLTEFHLDE KLPEKETIVI PEVRGLPIND ATSMLKELGI SYEIEGEGEF IVESNPSPGY PISPDTKITL IAGDSSNLNS DVIIPDFKNY SKESAEKLLN QLGLIGEFVG EGPSITKQSI SPDEVVNGNS KITLTLGY
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