| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0527 |
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| Symbol | |
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| ID | 4205976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 624365 |
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| End bp | 625072 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565084 |
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| Product | trehalose operon transcriptional repressor |
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| Protein accession | YP_697855 |
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| Protein GI | 110803958 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02404] trehalose operon repressor, B. subtilis-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAGTA AGTATTTAAA AATATATAAT GATATTGTTG GAAAAATAGA TAGTGGAATT
TTTGAAGCAA ATACTAAATT GCCTTCAGAA TCACAACTTA TGGATGAATA TAATGTATCT
AGGGATACTG TAAGAAAATC TTTAAATTTA TTAGAGCAAA ATGGGTATAT TGAAAAATCT
AAAGGTAAGG GATCTTTTGT ACTTGATATG AATAAATTTG ATTTTCCTGT GTCAGGTATA
AAGAGTTTTA AAGAGATTGA AAATAGCTTA GGAAAAGAGT GTGAAACTAT ATTAGAAGAA
TTAACATTAA AAAGTCCTAG TGATAGCCTT ATGAAAAAAC TAGAGGTTTC TCCTAATAAA
TATGTTTGGC GTGTAGTAAG AGTTAGAAAT ATAGATGGTG AAAAGATAAT CTTAGATAAG
GACTATTTAA ATTCAGAGTT TGTTCCAAGA CTTACAGAAG AAATATGCAA GGATTCTTTA
TATAAATATA TAGAGGAAGA ATTAGGATTA AAGATAGCCT ATGCTGAAAA AGAGATAACA
GTACAAACTG CTACTGAGGA AGATCAAAGA CTTTTAGATT TAAGAGGATA TGATATGGTA
GCTGTGGTTA AAAGCTATAC ATATTTAGAG GGAAGGAAAT TATTTCAATA CACAGAGTCA
AGACATAGAC CAGATAAGTT TAAGTTTGTA GATTTTGCAA GAAGATAG
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| Protein sequence | MSSKYLKIYN DIVGKIDSGI FEANTKLPSE SQLMDEYNVS RDTVRKSLNL LEQNGYIEKS
KGKGSFVLDM NKFDFPVSGI KSFKEIENSL GKECETILEE LTLKSPSDSL MKKLEVSPNK
YVWRVVRVRN IDGEKIILDK DYLNSEFVPR LTEEICKDSL YKYIEEELGL KIAYAEKEIT
VQTATEEDQR LLDLRGYDMV AVVKSYTYLE GRKLFQYTES RHRPDKFKFV DFARR
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