Gene CPR_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0515 
SymbolspeE 
ID4205085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp610620 
End bp611471 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content31% 
IMG OID642565072 
Productspermidine synthase 
Protein accessionYP_697843 
Protein GI110803121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAT GGTACACAGA AGAACATACA GACAAAGTAC GTTTTTCAAT CAAAGTAGAT 
GAACAACTTT ATAGTGGAAA GAGCGATTTC CAAAGAATAG ATGTTTTTAA ATCTCAAGAG
TTTGGAACTT TCTTCACATT AGATGGACTT ATGATGGTAA CAGAAAAGGA TGAATTTATT
TATCATGACA TGATAGTTCA TGTTCCAATG GCTACAAATC CTAATATAAA AAATGTACTA
GTTATAGGAG CAGGAGATGG TGGAACTGTA AGAGAACTTA CAAGATATGA AACTATAGAA
AAAATAGACA TGGTTGAAAT TGATAAGTTA GTTGTTGATG TTTGTAGAGA ATATTTACCT
CAAACAGCTA ATAAATTAGA TGATCCTAGA GTAAGTTTAT TCTTTGAAGA TGGATTAAAA
TTTGTACGTT CAGTTGAAAA TAAATATGAC TTAATAATAG TTGATTCAAC AGATCCCTTT
GGACCTGGAG AAGGTTTATT CACAAGAGAA TTTTATGGAA ATTGCTTTAA GGCCTTAAAA
GAAGATGGAA TACTTGTAAA TCAACATGAA AGCCCATACT ATGAAGAGTA TGCAAGGGGG
ATGAAGAGGG CTCATAAGAG AATAAAAGAA TGTTTCCCAG TATGTAGAGT TTATCAAGCT
CATATACCAA CTTATCCATC AGGACATTGG CTATTTGGTT TTGCATCAAA AAAATATGAT
CCACTAAATG CTAATATAGA AAAGTGGAAT GATTTAGGAT TAAAAACTAA ATATTATAAC
ACTGATTTGC ATAAAGGATG TTTTGCATTA CCTAATTATG TTAAGGAGAT GCTAGAGAAT
GTTGATGAAT AG
 
Protein sequence
MELWYTEEHT DKVRFSIKVD EQLYSGKSDF QRIDVFKSQE FGTFFTLDGL MMVTEKDEFI 
YHDMIVHVPM ATNPNIKNVL VIGAGDGGTV RELTRYETIE KIDMVEIDKL VVDVCREYLP
QTANKLDDPR VSLFFEDGLK FVRSVENKYD LIIVDSTDPF GPGEGLFTRE FYGNCFKALK
EDGILVNQHE SPYYEEYARG MKRAHKRIKE CFPVCRVYQA HIPTYPSGHW LFGFASKKYD
PLNANIEKWN DLGLKTKYYN TDLHKGCFAL PNYVKEMLEN VDE