Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0514 |
Symbol | |
ID | 4206103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 609151 |
End bp | 610605 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565071 |
Product | Orn/Lys/Arg decarboxylase |
Protein accession | YP_697842 |
Protein GI | 110803814 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAGAC TTTCTCAAGA AAATGCTCCT ATTTATGAAG CATTAAAATG GTACAAGAAT CAAAGAATTG TTCCTTTTGA TGTACCAGGT CATAAACAAG GAAGAGGAAA TACAGAATTA AGAGAGTTTT TAGGTGAAGA TTGTGTTTCA GTAGATGTAA ATTCAATGAA ACCCTTAGAT AATCTTTGTC ATCCAACTTC TGTAATAAAG GATGCAGAAG AATTAGCAGC TGAGGCCTTT AGTGCTGATA AGGCATTTTT CATGGTTAAT GGAACCACAT CAGCTGTACA AGCCATGATA ATGAGTGTTT GCAAAGATGG AGATAAGATT ATAATGCCTA GGAATGTGCA TAGATCTGCA ATAAATTCTT TAATAATAAC AGGGGTAACT CCTGTGTATA TAAATCCAGG AATTCATGGT AGACTTGGAA TTTCTCTAGG AATGGCAATG GAAGATATAA AAAAAGCCAT TAAGGAAAAT CCAGATGCTA AGGCTATTTT TGTTAATAAC CCAACATACT ATGGAATTTG CTCTAATTTA AGAGAAATAG TTAAGTTAGC TCATGAAAAT AATATGTATG TCTTAGTTGA TGAAGCTCAT GGAACTCATT TTTATTTTGA TAAAAGACTT CCAGTATCAG CTATGGAGGC AGGGGCAGAT ATGGCAGCAG TTAGCATACA TAAAACAGGA GGCTCATTAA CTCAGAGTTC TATGTTACTT ATGAAGTGTA ATAGAATTAA GCCAGATTAT GTGAGAACAA TAATAAACTT AACACAAACA ACTAGTGGTT CTTATTTACT TTTATCTTCT TTAGATATTG CTAGAAGAAA TTTAGCATTA AATGGAGAAA AAATATTTGA AGAGGTTGTT GGAATAGCTG AATATGCAAG AGAAGAAATA AATAAGATAG GTGGTTATTA CGCTTTCTCA AAAGAAATAA ATAATGGTGA TGATATTTAT GATTTTGATG TAACTAAGCT TACTATAAAC ACTTTAGAAA CTGGACTTGC TGGAATAGAA GTTTATGACA TATTAAGAGA TGATTATGGA ATTCAAATAG AGCTTGGAGA TGTGGCTAAT ATTCTTGCCA TAATATCAGT TGGAGATACT AGATATAACA TTGAGAGATT AGTTTCAGCT TTAAGTGAGA TTAAGAGAAT TCATGAAAAA GATAAAAAAG ATATTTTTGA CCACGAATAT ATAGATCCTA TAGTTAAGGT TAAGCCGAAG GAGGCTTTTT ATGCTAAAAA GAAGAAGGTT CTTTTGAGAG AAAGTGAAGG ATTAATTTCT GGAGAATTTG TAATGTGTTA TCCACCAGGA ATTCCAATAC TTGCCCCAGG AGAGCTTGTA ACTAAGGAGA CTATAGATTA TATTGAGTAT TCTAAGAAAA AGGGAAGTTT AGTTACAGGA CCTGAAGATA TGGAAATTGA ATATATAAAT GTTTTGGATT TTTAG
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Protein sequence | MKRLSQENAP IYEALKWYKN QRIVPFDVPG HKQGRGNTEL REFLGEDCVS VDVNSMKPLD NLCHPTSVIK DAEELAAEAF SADKAFFMVN GTTSAVQAMI MSVCKDGDKI IMPRNVHRSA INSLIITGVT PVYINPGIHG RLGISLGMAM EDIKKAIKEN PDAKAIFVNN PTYYGICSNL REIVKLAHEN NMYVLVDEAH GTHFYFDKRL PVSAMEAGAD MAAVSIHKTG GSLTQSSMLL MKCNRIKPDY VRTIINLTQT TSGSYLLLSS LDIARRNLAL NGEKIFEEVV GIAEYAREEI NKIGGYYAFS KEINNGDDIY DFDVTKLTIN TLETGLAGIE VYDILRDDYG IQIELGDVAN ILAIISVGDT RYNIERLVSA LSEIKRIHEK DKKDIFDHEY IDPIVKVKPK EAFYAKKKKV LLRESEGLIS GEFVMCYPPG IPILAPGELV TKETIDYIEY SKKKGSLVTG PEDMEIEYIN VLDF
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