Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0499 |
Symbol | idhA |
ID | 4205792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 593105 |
End bp | 594103 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565056 |
Product | D-lactate dehydrogenase |
Protein accession | YP_697827 |
Protein GI | 110802574 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAT TAGTATGTTA TGGAGTTAGA GAAACAGAGG TACCATACTT CCATAAGTTA AATGAAGAGT TCGGATATGA TTTAACTTTA GTTGAAAAAA ACTTAAACCA TGAAAATGTA GAGGAAGCTA TAGGGGCTGA GGCTATAATG GTAAGAGGAA ACTGTATGGC TGATAGACAA AATTTAGAAC TATTAAAGAG TAAGGGTCTT AAATATGTTT TAACTAGAAC TGTTGGATTT GACCATGTTG ATTTAGAAGC TGCTAAGGAT TTAGGATTAC AAGTTGCTAG AGTACCAGGT TACTCACCAA ATGCTATAGG AGAATTAGCT GTGAGTTTAG CTATGATGCT TTTAAGACAT ACAGCATACA CTACTCATAG AACAAGCAAT AAAAACTTTG TAGTAGATGG ATTTATGTTT AGTAAAGAAA TAAGAAACTG TACAGTTGGA ATATTAGGGG CAGGTAGAAT CGGATTAACA ACTGCTAAAT TATTTAAAGG ATTAGGAGCT AAGGTTGTAG CATATGATGT ATTCCAAAGT GATGCCGCTA AGGAAATAGT TGAATTTATG CCTTTAGATG AAGTTTTAAA AGTTTCTGAT GTAATATCAG TACATATGCC ATATATAAAA GGGCAAAATT ATCACATGAT AAATGAAGAA TTCATATCAA AAATGAAAAA TGATGCTATT ATAATCAATA CTGCAAGAGG AGAATTACAA GATATAGAGG CTATAGTAAA AGCTCTTGAA GAAGGAAGAT TAGGCGGATT TGGAACTGAT GTTTTAGAAG GGGAATCAGC GGTATTTTTC AAAAACTTAG AGGGACAAAA GTTAGAAAAT GAGTCATATG AAAAATTAAT AAGCTTATAC CCAAGAGCTT TAGTAACTCC TCATATGGGT TCATATACAG ACGAGGCTTT AAGAAATATG ATAGGAATAT CATATGAAAA CTTAAAGGAG TATTTAGAAA AAAATACTTG TAAAAATGCA ATAGCATAA
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Protein sequence | MIKLVCYGVR ETEVPYFHKL NEEFGYDLTL VEKNLNHENV EEAIGAEAIM VRGNCMADRQ NLELLKSKGL KYVLTRTVGF DHVDLEAAKD LGLQVARVPG YSPNAIGELA VSLAMMLLRH TAYTTHRTSN KNFVVDGFMF SKEIRNCTVG ILGAGRIGLT TAKLFKGLGA KVVAYDVFQS DAAKEIVEFM PLDEVLKVSD VISVHMPYIK GQNYHMINEE FISKMKNDAI IINTARGELQ DIEAIVKALE EGRLGGFGTD VLEGESAVFF KNLEGQKLEN ESYEKLISLY PRALVTPHMG SYTDEALRNM IGISYENLKE YLEKNTCKNA IA
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