| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0487 |
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| Symbol | |
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| ID | 4206276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 579102 |
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| End bp | 580397 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 21% |
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| IMG OID | 642565044 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_697815 |
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| Protein GI | 110803636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0885624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATGTAA ATAATGTTAT AAAATTATTT TATATTATAT ACATTTTTTT TATTGGTATT
TATAGCTTTT TTTATTTGGA CAAAAAAATT GAATTGAAAA AGAGAGTGTT TAGTACAATT
ATTTTAAATT TTCTTATTCT AATTATTAAC TATATTTTTT ATATTAATGA TCTTTCATTT
TTTTTTGAAG CTTTAATTAT ATATATATAT TATTTTTATT TGTATAAAAA GAACACAAAA
TCCATATTAA TGTCTTCCAT ATATTTATTA AATCTTTCAT TGGGAAAATA CATACTAATT
TTTATATATT CAGTTATGAT TTTTGATTTA GAAGTGTTAA AAATTATGAA TAATATTATG
TTTCTTTGCT TCATAATACT TTTAATATTA ATGATTACAG TAGTTGTATT TATAGTGAAC
TTCTTTAAAA ACTGTATTAT AAATGTAAAT GACTTAACAG TAAAAAAACA AACTAAACTT
GTATTTATAA TTGGAATAGC TGTGTTATTA TCTGAAAAAG TTTTTGATAA TATTGCACTA
AATGCTAGTT TAGTCTATAG GGTTAATATA AGCACAATTA GTATAGCTAT AAATTTAGCT
ATAATACATT TTATTACATA CAAGAGGTTT AAAGAATATA AGGCTAATTC TCAAATAAAT
ATTTTAGAGA AACAATTAGA TTATCAAAAA AATTATTATG AGAAGGTAAT TAATAACTAT
GGTGAGGCGA GAAAAGCTCT TCATGATATG AATAATCATA TGAGTGTTAT TAAGTATTTT
TTAGAAAATA AAGATTATAA GAATATGGAT GATTATATAC AATCCTTAAG TGAGAGGATT
GTTACAAATA AGGATAATAA TATATGTAGA AATAAAGTTA TAAATGCTAT ATGTCTCGAC
AAATGTGAGA GGTGTAAAAA GGCAGGAATT AATATAAGAT TTGATACTGT TATAAATTCA
AAGATAAATA TTGATGACTT AGATTTATGC ATTGTTTTAG GGAATTTAAT TGATAATGCC
ATAGAAGCTT GTGAAAAAAT AAATGAGAAA GAGCTTCAAA GGGTTATTCA AGTTAGTGCT
AGAATTTATT TAAATCAAAT TTATATTAAG GTAATTAATT CTAAAAATAA TAAAGTTGAA
AAGAAAAATA ACAAGTTTTT AACTAGTAAA AAAGATAAGA AAAATCACGG AATAGGATTA
GAAAATGTAA AAGAATCCGT TTATAAAAAT CAGGGAAATA TTGAAATTAA AGATTCAAAA
AATACTTTTG AAGTAAGTTT ATATATGAAG TGTTAA
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| Protein sequence | MYVNNVIKLF YIIYIFFIGI YSFFYLDKKI ELKKRVFSTI ILNFLILIIN YIFYINDLSF
FFEALIIYIY YFYLYKKNTK SILMSSIYLL NLSLGKYILI FIYSVMIFDL EVLKIMNNIM
FLCFIILLIL MITVVVFIVN FFKNCIINVN DLTVKKQTKL VFIIGIAVLL SEKVFDNIAL
NASLVYRVNI STISIAINLA IIHFITYKRF KEYKANSQIN ILEKQLDYQK NYYEKVINNY
GEARKALHDM NNHMSVIKYF LENKDYKNMD DYIQSLSERI VTNKDNNICR NKVINAICLD
KCERCKKAGI NIRFDTVINS KINIDDLDLC IVLGNLIDNA IEACEKINEK ELQRVIQVSA
RIYLNQIYIK VINSKNNKVE KKNNKFLTSK KDKKNHGIGL ENVKESVYKN QGNIEIKDSK
NTFEVSLYMK C
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