Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0463 |
Symbol | |
ID | 4204313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 549505 |
End bp | 550239 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 642565020 |
Product | hypothetical protein |
Protein accession | YP_697792 |
Protein GI | 110801464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000202427 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT TAAAAACAAT ATTAAAAAAA ATAGGGATTT ATAAAATTCT TTTGAATATT CCATATTTAA AAGAAAAAAA GAGAAAATAT GGATTAAAAA TAAATAGAGA TAGGAAAGAA GCATTTGATA AATTTGCTTA TGATTGTTTA AAAAAAGTTA AGAATACTAT GGATGAAAAT GATATAACGT TTTGGCTTGA TTTTGGGACT TTATTAGGAG CCATAAGAGA AAATGATTTT ATTGAACATG ATTTAGATTT AGATTTTGGA ATAGATTTTT CAAGTAATCC TCAATTTGTA AAAGAAGTTT TTGAAAAAAA TGGAGTTTCA ATTTTAAAAG AGTTTATTTT AGACGGTCAA GTAGTAGAAC AGACATATAG TTATAAAGGT GTTACTTTTG ATATATTTTT TTATTTTAGA GATAAAAACA ATATGTGGAC ATATTGTTTT ACAAAAAGAG ATGTTAAATC TAAAAACATA ACTATTGATA ACATTATTTA TAATATTGGA TTTAAATCTT TTAAGGTTGT TATGAAAAAT AGATATACAA AAAAAATAAT TTTTAAAGGA GAAAGTTTTG ATGTTCCTGA AAATACAGAA GAATATTTAA TTGAAAATTA TGGACCAAAT TATATGACTC CTATAAAGGA TTGGGATTTT GTGAATTCAC CTTCTAATAT GTATGAAATA GAAAATAAAT ATGTAATAGA AGTTATTAGT TCTAATTTTA ATTAG
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Protein sequence | MKILKTILKK IGIYKILLNI PYLKEKKRKY GLKINRDRKE AFDKFAYDCL KKVKNTMDEN DITFWLDFGT LLGAIRENDF IEHDLDLDFG IDFSSNPQFV KEVFEKNGVS ILKEFILDGQ VVEQTYSYKG VTFDIFFYFR DKNNMWTYCF TKRDVKSKNI TIDNIIYNIG FKSFKVVMKN RYTKKIIFKG ESFDVPENTE EYLIENYGPN YMTPIKDWDF VNSPSNMYEI ENKYVIEVIS SNFN
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