Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0462 |
Symbol | |
ID | 4205676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 548373 |
End bp | 549548 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 18% |
IMG OID | 642565019 |
Product | polysaccharide polymerase, putative |
Protein accession | YP_697791 |
Protein GI | 110802623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000183254 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTTAA ATATAGATAA ATTTATAAAT AAACTAATAC TAATATATCC TCTTATAGTT TTAATTTGTG AAATAATCAA TAAAAATTTT GGCATAGATT TACTAATGAA ATTTACATTT ATAATATTTT TGTTGATTTT ACTAAAATTT AAAGACATTA AAATGAAATT TTTAATTTTT ATTATATTGT CTATAAATAC CCTACAATTT ATAATGGGTT ATAAATTTTT TGATTATAAT ATATTAATTC GTTTTTTAAT TTTTTTAACT TTTTTAGGCT TTTTTTCGAA TAAGAAAAAT ATTTGTATAT TTAAACATTA TATTGATTTA AATAAAAATA TATTAATAAA TATTTTTAAA GCTTGTTCTA TTATAATTTT TATATATTTA TTTTTAAATC AAGGTTATGT AAATAAATGG GGAGGGAATA ATTATTTTAT AGGACCTTTT AGCTCTCCTC ATAAGATGGG ATATTATTTA CTTGGATTAC AAGCAATGGA TATATTTATT GACAAAAATT TTAGAAAAAA ATCAAATTTA TTCTATCAAA GTATATTTGT TATTCTACAG ATGCTAACAG GTGCAAGAAT ACCACTTTTA GTTAGTGTTA TAACAGTATT ACTTGCTTTA AAAAAATATA TAAAAACTAG AGCAAGATTT ATTATAATTT TGATATTTTT ATTAATAATT ACTCTAATTA TAGTATTTGA AAAAGATATT ATAAAAGATA TTCCTTTTAT ACAAAAATTT ATTTATACAG AAGGAAAAGA TAGTTTATCT AGTGGAAGAG ATTTAATTTG GAAGGCAAAT TTAAATGTAT ATAAAGATAG TGCTTTATAT ATAAAATTGC TAGGAAATGG AATGTTATAC TCTTTTTATG CTAATTTATT ATACTTAAAT AATGAAATAT GGTCACATAA TGATTTTATA CAAATTTTAT TAGGTAATGG TTTGATTGGA TTAATAATAT ATTGTGTTAT GTTATTAAAT TTATGTAGGA TTTATAAATC AGAAATTTTA TTAATAGTAT TATTTATATT AGCATTTTTT AATGGATTAT TCACTTATTA TTTTTTTGGT GTTATGATCA TATATTATTT AATGGCTATA TATAATTTTA AAGGAGAATA TTATGAAAAT ATTAAAAACA ATATTAAAAA AAATAGGGAT TTATAA
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Protein sequence | MVLNIDKFIN KLILIYPLIV LICEIINKNF GIDLLMKFTF IIFLLILLKF KDIKMKFLIF IILSINTLQF IMGYKFFDYN ILIRFLIFLT FLGFFSNKKN ICIFKHYIDL NKNILINIFK ACSIIIFIYL FLNQGYVNKW GGNNYFIGPF SSPHKMGYYL LGLQAMDIFI DKNFRKKSNL FYQSIFVILQ MLTGARIPLL VSVITVLLAL KKYIKTRARF IIILIFLLII TLIIVFEKDI IKDIPFIQKF IYTEGKDSLS SGRDLIWKAN LNVYKDSALY IKLLGNGMLY SFYANLLYLN NEIWSHNDFI QILLGNGLIG LIIYCVMLLN LCRIYKSEIL LIVLFILAFF NGLFTYYFFG VMIIYYLMAI YNFKGEYYEN IKNNIKKNRD L
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