Gene CPR_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0462 
Symbol 
ID4205676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp548373 
End bp549548 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content18% 
IMG OID642565019 
Productpolysaccharide polymerase, putative 
Protein accessionYP_697791 
Protein GI110802623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000183254 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTAA ATATAGATAA ATTTATAAAT AAACTAATAC TAATATATCC TCTTATAGTT 
TTAATTTGTG AAATAATCAA TAAAAATTTT GGCATAGATT TACTAATGAA ATTTACATTT
ATAATATTTT TGTTGATTTT ACTAAAATTT AAAGACATTA AAATGAAATT TTTAATTTTT
ATTATATTGT CTATAAATAC CCTACAATTT ATAATGGGTT ATAAATTTTT TGATTATAAT
ATATTAATTC GTTTTTTAAT TTTTTTAACT TTTTTAGGCT TTTTTTCGAA TAAGAAAAAT
ATTTGTATAT TTAAACATTA TATTGATTTA AATAAAAATA TATTAATAAA TATTTTTAAA
GCTTGTTCTA TTATAATTTT TATATATTTA TTTTTAAATC AAGGTTATGT AAATAAATGG
GGAGGGAATA ATTATTTTAT AGGACCTTTT AGCTCTCCTC ATAAGATGGG ATATTATTTA
CTTGGATTAC AAGCAATGGA TATATTTATT GACAAAAATT TTAGAAAAAA ATCAAATTTA
TTCTATCAAA GTATATTTGT TATTCTACAG ATGCTAACAG GTGCAAGAAT ACCACTTTTA
GTTAGTGTTA TAACAGTATT ACTTGCTTTA AAAAAATATA TAAAAACTAG AGCAAGATTT
ATTATAATTT TGATATTTTT ATTAATAATT ACTCTAATTA TAGTATTTGA AAAAGATATT
ATAAAAGATA TTCCTTTTAT ACAAAAATTT ATTTATACAG AAGGAAAAGA TAGTTTATCT
AGTGGAAGAG ATTTAATTTG GAAGGCAAAT TTAAATGTAT ATAAAGATAG TGCTTTATAT
ATAAAATTGC TAGGAAATGG AATGTTATAC TCTTTTTATG CTAATTTATT ATACTTAAAT
AATGAAATAT GGTCACATAA TGATTTTATA CAAATTTTAT TAGGTAATGG TTTGATTGGA
TTAATAATAT ATTGTGTTAT GTTATTAAAT TTATGTAGGA TTTATAAATC AGAAATTTTA
TTAATAGTAT TATTTATATT AGCATTTTTT AATGGATTAT TCACTTATTA TTTTTTTGGT
GTTATGATCA TATATTATTT AATGGCTATA TATAATTTTA AAGGAGAATA TTATGAAAAT
ATTAAAAACA ATATTAAAAA AAATAGGGAT TTATAA
 
Protein sequence
MVLNIDKFIN KLILIYPLIV LICEIINKNF GIDLLMKFTF IIFLLILLKF KDIKMKFLIF 
IILSINTLQF IMGYKFFDYN ILIRFLIFLT FLGFFSNKKN ICIFKHYIDL NKNILINIFK
ACSIIIFIYL FLNQGYVNKW GGNNYFIGPF SSPHKMGYYL LGLQAMDIFI DKNFRKKSNL
FYQSIFVILQ MLTGARIPLL VSVITVLLAL KKYIKTRARF IIILIFLLII TLIIVFEKDI
IKDIPFIQKF IYTEGKDSLS SGRDLIWKAN LNVYKDSALY IKLLGNGMLY SFYANLLYLN
NEIWSHNDFI QILLGNGLIG LIIYCVMLLN LCRIYKSEIL LIVLFILAFF NGLFTYYFFG
VMIIYYLMAI YNFKGEYYEN IKNNIKKNRD L