Gene CPR_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0454 
Symbol 
ID4205775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp541348 
End bp542016 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content31% 
IMG OID642565011 
Productglycosyltransferase, putative 
Protein accessionYP_697783 
Protein GI110802943 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.02874e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAT CTATGGAGAA GATTCAAGAA GGAAAAGAAT ATATAAAAGT AGATCAAGGA 
AATAGAGTAT ACTTATTTTT TAAGAGAGTA ATGGATATCC TTGGATCAGG CTTTGGATTA
ATCACATTAA GTCCATTATT TTTGATTGTA GCAATAGCTA TAAAATTTGA AGATAGCAAG
GGGAGTGTAC TATTTTCACA AAAAAGAGTT GGACAGTATG GTAAAGAATT TAATATGTAC
AAGTTTAGAT CCATGGTTAG TAATGCAGAA GAGCTTAAAG CTAAGCTTAT GGAGCAAAAT
GAAATGTCAG GACCTATGTT TAAAATGAAA CATGATCCTA GAATAACTAA GGTTGGAAAG
TTTATAAGAA AAACTAGTAT AGATGAACTT CCTCAGCTTA TAAATATTCT TAAGGGTGAA
ATGAGCTTAG TTGGTCCTAG ACCAAGCCTT CCAAAGGAAG TAGCTAAATT TGAACCTTGG
ATGTTAGAAA GGTTAGAAGT GAAGCCAGGA TTAACATGTT ATTGGCAAGT TATGGGGAGA
AATGATATAG ATTTTGAAGA TTGGATGAAG CTTGATATAA AGTATGTTCA TGATAGAAAT
CTTTTTTTAG ATATAAAATT GATTTTTAAA ACATTTTTTG TTCTTTTTGG AGATGAAAGT
GCAAGTTAA
 
Protein sequence
MYESMEKIQE GKEYIKVDQG NRVYLFFKRV MDILGSGFGL ITLSPLFLIV AIAIKFEDSK 
GSVLFSQKRV GQYGKEFNMY KFRSMVSNAE ELKAKLMEQN EMSGPMFKMK HDPRITKVGK
FIRKTSIDEL PQLINILKGE MSLVGPRPSL PKEVAKFEPW MLERLEVKPG LTCYWQVMGR
NDIDFEDWMK LDIKYVHDRN LFLDIKLIFK TFFVLFGDES AS