Gene CPR_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0393 
Symbol 
ID4205920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp480137 
End bp480778 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content32% 
IMG OID642564950 
ProductKHG/KDPG aldolase 
Protein accessionYP_697722 
Protein GI110803980 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA AAATAAAAAC ATTAATAAAT TTAATAAATG AAGCTTTTGT ATTGGTTCTT 
AGAACCAATA CAAAAGATGA AGGTATAGAA ACTGCAAAGG CTGCAATAAA GGGAGGATGT 
AATATTATAG AGGTTACATT TACTATTCCA AATGCAGATA AGGTAATTGA AGAGCTTATT 
AAAGATAAGA ATGAAGAAGT AGTTATTGGA GCAGGTACTG TTTTAGATGC TGAAACAGCT 
AGAATTGCAA TACTTGCAGG TGCAGAATTT ATTGTTAGTC CAAGCTTTGA TAGAGAAACA 
GCTACACTAT GTAATAGATA TGGAGTTCCT TATATTCCAG GATGTTTTAC ACCAAGAGAA 
ATCAAGGAAG CTAGAGAATT TGGATCAGAC GTAATAAAAT TATTCCCAGG ATCAGCTTTC 
AAGCCAACTA TAGTAAAAGA TCTAAAGGCT CCTATAAAAG GTATTGCAGT AATGGCATCA 
GGTGGGGTTA GTTTTGAAAA TATGGATGAA TGGTTTAATA ATAGTTGCGA TATAGTTAGT 
ATTGGAAGTG CTATTATAAA ACTAAAAGAT CCTGCAAAAA TAGAAGCAGA AACTAGAAAA 
TATATAGAAC GTGTTAAAAA ATTACGTATA CAACGAGGTT AG
 
Protein sequence
MIKKIKTLIN LINEAFVLVL RTNTKDEGIE TAKAAIKGGC NIIEVTFTIP NADKVIEELI 
KDKNEEVVIG AGTVLDAETA RIAILAGAEF IVSPSFDRET ATLCNRYGVP YIPGCFTPRE 
IKEAREFGSD VIKLFPGSAF KPTIVKDLKA PIKGIAVMAS GGVSFENMDE WFNNSCDIVS 
IGSAIIKLKD PAKIEAETRK YIERVKKLRI QRG