| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0389 |
|---|
| Symbol | |
|---|
| ID | 4204600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 474429 |
|---|
| End bp | 475280 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642564946 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_697718 |
|---|
| Protein GI | 110802409 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGG TAGTCTATAG AATTACTGCT ATAATTCTTT TTGGGGCTTT AGCTGGAATC
GGGGTTAACT TTTTCTTAAC ACCTGCACAT ATTTATTCAT CAGGTGTTAC AGGAATATCA
CAGCTATTAT CATCTATTGG TGGAGATTTT TTTAATATAA ACATTGACAT TTCAACATGG
GTTTTAATTT TAAATCTACC ACTTGCGTAT TTATCATTTA GAAAATTAGG AAAGAAATTT
ACACTTTATA GTTTTCTTTC TATAATTTCA TTATCATTTT TTATAGGGAT TATTCCAACA
AGAGCTGTTA CTAATAACCA ACTTTTAAAT TCCATATTTG GAGGAGTTCT TATGGGAGCT
GGAGTTGGAA TGTGCTTTAG AGCAGGATTT TCTACTGGAG GTACAGATAT TATAGTTTTA
GTTGTTCAAA AAATGACAGG GAAGTCAGTT GGTCAACTAG GATTTATAGT AAATGGAATA
ATATTATTAG TTGCAGGATT AGTTTATGGA TGGGAATTAG CTTTGTATAG CTTAGTTTCA
ATTTACGTAA CTACTAAGGT TATAGACTTA TTTTACATTC AACAATATAA ACTTACAGTA
ACAATTTATA CTAAAAAAGA AAAAGAAATT GTGGATAGTT TAATTAAGAG TCAAATGAGA
GGAGTTACAA TTGGTAGAAA TCTTTATGGT GGATATACTA ATGAACCATT AAGCTCAATT
ACCACAGTAA TTTCAAAGCA TGAATTATTA ATTGTTAAGA AAAATGTTAT GGATATAGAC
CCAGAAGCAT TTGTAAACAT ACAGCCAACT GTTGAAGTTA TGGGTAATTT CTATGATAAT
TCATTAATAT AA
|
|---|
| Protein sequence | MYQVVYRITA IILFGALAGI GVNFFLTPAH IYSSGVTGIS QLLSSIGGDF FNINIDISTW
VLILNLPLAY LSFRKLGKKF TLYSFLSIIS LSFFIGIIPT RAVTNNQLLN SIFGGVLMGA
GVGMCFRAGF STGGTDIIVL VVQKMTGKSV GQLGFIVNGI ILLVAGLVYG WELALYSLVS
IYVTTKVIDL FYIQQYKLTV TIYTKKEKEI VDSLIKSQMR GVTIGRNLYG GYTNEPLSSI
TTVISKHELL IVKKNVMDID PEAFVNIQPT VEVMGNFYDN SLI
|
|---|
| |