Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0290 |
Symbol | |
ID | 4204123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 346604 |
End bp | 347461 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564847 |
Product | hypothetical protein |
Protein accession | YP_697619 |
Protein GI | 110801548 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000120699 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTA GTATGAAAAC ATTAAAAGAG TATGGAATAA TTACTTTAGG AGTAATTCTT TTAGCTATAT CTTTAGAATA CTTTTATTAT CCTAATGATA TTGCTGCTGG TGGAGTATCG GGTTTAGCTT TAGTTATTAA CAAGATAACA GGTATATCAC AAGGAATGTT TATGAATGTT GCTAACGTTA TATTATTTGC CTTAGCATTT TGGCTTATAG GTGGAAGCTT TGGAGGGCGT AGTATATATG CAGCCTTTGG ATTATCCATA ACAATAAGTT TAATAGAAAG CTTTTTACCA ACTTTTGCAT TAACAGAAAA TATGCTTTTA GCTACTATCT TTGGTAGCGT AGTTGGAGCC TTTGGAATAG CATTAGTGTT TAGCCAAAAT TCTTCAACAG GGGGAACGGC CATTGTAGCT AAAATATTAA ATAAATATTT ACATATTGAA ATAGGAAAAT CACTTTTATG TGCAGATTGC GTTGTTGTAG TATGTGCACT TCTAGTATTT GGAGTTGATA AAGCCTTATT TGGATTAATT GGTGTTTTTA TAATGGGAAT ATTGATTGAT AAAATAATAG AAGGTTTTAA TTCATGTAAA CAACTTTTAA TAATTAGTGA AAAAAGTGAA GAAATTTCTC AGGTAATAAT GAAAGAAATT GAAAGAGGAT GTACTAAAAT AGAAGGTACT GGAGGATATT CAAAGGAACC TGTAACAATA CTTTATGTAG TAGTAAATAG AAGACAGTTT ATAAGTCTTA AAAAGAAAAT TAAGGAAATA GATCCAAGAG CCTTTATAAC AGTAAATGAT TCTAAAGAAG TCTTTGGAGA AGGTTTTCTT GATTTAGTAG AAATGTAG
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Protein sequence | MKISMKTLKE YGIITLGVIL LAISLEYFYY PNDIAAGGVS GLALVINKIT GISQGMFMNV ANVILFALAF WLIGGSFGGR SIYAAFGLSI TISLIESFLP TFALTENMLL ATIFGSVVGA FGIALVFSQN SSTGGTAIVA KILNKYLHIE IGKSLLCADC VVVVCALLVF GVDKALFGLI GVFIMGILID KIIEGFNSCK QLLIISEKSE EISQVIMKEI ERGCTKIEGT GGYSKEPVTI LYVVVNRRQF ISLKKKIKEI DPRAFITVND SKEVFGEGFL DLVEM
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