| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0271 |
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| Symbol | |
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| ID | 4206599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 329558 |
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| End bp | 330580 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642564829 |
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| Product | cell envelope-related function transcriptional attenuator |
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| Protein accession | YP_697601 |
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| Protein GI | 110801829 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.968761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAG GCAAACATGC AAAAAAGAAT GATTCTAATA GTCAAGGTAA TACACCTAAG
AAAAAAAGTA AAGTGAAAAT AATAGTATTA ACATTATTCT TCTTATTACT TATAGGTATA
GGACTTGGAG CTACATATGT TTACTCAACA TTAAATAAAA TGGATATAAA GAAAATAGCT
CAAGATGATA AATCTTTAGG TATTGATGAA TCAAATAAAG ACCTATTCCA AGATGGTATT
TTAAATATAG CTCTTTTTGG AGTAGATAGC AGAGATCATA ATAATGTTGG ACGCTCTGAT
TCAATAATAA TAGCTACAAT AGATACTAAA CATGATAAAA TAAAACTTAC ATCTCTTATG
AGAGATAGTT ATGTTGAAGT TGATGGACAT GGTAAAACTA AATTAACTCA TGCTTATGCT
TATGGTGGTC CTACTTTAGC ATTAAAAACA ATAAATGAAA ACTTTGGATT AGATATAAAA
GACTATGTAA CTGTTAACTT TGATAACTTA GCTGAAATAA TAGATGATTT AGGTGGAGTA
CCAATAAATA TAAAACCTTA TGAAGTTAAG GAAGTTAATA ATTACGCTAA AAATGTTGCA
GAAATTGCTG GAAGAGAATA TACGCCAGTT AGTGAAGGTG AGCAAGTATT AAATGGTGCC
CAAGCTGTAG GTTACTCTAG AATTCGTTAT GTTGGTGATG GAGATTATGA AAGAACTGAA
AGACAAAGAA ATGTTCTTGA TGCAATCATA AAGAAACTTT CAACATTAAA ACCTTCTGAA
TATCCTGAAA CAATAAAAAA ATTTTTACCT TATGTTGAAA CAAACTTAAC TCCATCTAAA
ATACTTAGTA TTGCTAAATC AGTTGCTTCA ACTGGTATCC CACCTGTTGA AAATATGCGT
TTCCCTCTAA ATGGATATTG CAAAGGGGAA ATGATTGATG GTGTTTGGTA TTTAACATTT
GATGAAGCTA AAACAAAGGA ACAAATACAA AACTATATAT ATAAGGATGT TAATCCAAAA
TAA
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| Protein sequence | MSQGKHAKKN DSNSQGNTPK KKSKVKIIVL TLFFLLLIGI GLGATYVYST LNKMDIKKIA
QDDKSLGIDE SNKDLFQDGI LNIALFGVDS RDHNNVGRSD SIIIATIDTK HDKIKLTSLM
RDSYVEVDGH GKTKLTHAYA YGGPTLALKT INENFGLDIK DYVTVNFDNL AEIIDDLGGV
PINIKPYEVK EVNNYAKNVA EIAGREYTPV SEGEQVLNGA QAVGYSRIRY VGDGDYERTE
RQRNVLDAII KKLSTLKPSE YPETIKKFLP YVETNLTPSK ILSIAKSVAS TGIPPVENMR
FPLNGYCKGE MIDGVWYLTF DEAKTKEQIQ NYIYKDVNPK
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