| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0259 |
|---|
| Symbol | |
|---|
| ID | 4206564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 318953 |
|---|
| End bp | 320386 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 642564817 |
|---|
| Product | teichuronic acid biosynthesis glycosyl transferase, putative |
|---|
| Protein accession | YP_697590 |
|---|
| Protein GI | 110801852 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.636404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA TTTTTGAAGT TATGTTAAAA AAGAATATTG GAGATTTTAC ATATGAAGAG
AAAAGGGAAT TAAATAACTG GCTTATAGAA AATTTAAAAC TTAAAGAACT TATATATTCT
GGATTAGAAC TTACTAAAGT TATTAATGAG GATGGGGAAG AAACAGCATA CTATGAGAAT
AAAATAACCG AAGAAGATAT TTTATCAGGA AATTTCAATG AATTATGTTA TAAGACATCT
AAATATATAG ATGATGCTAT AAGCTCAATA TTATTTGAAG GACAATTTAA TTGTTTTTAT
GAAAAGATTA AAAGCATATT GGAATTAGAA GACTTTGATG AAATTATTGT TTTTCATGCT
TCCTTTGGAT GGAATATAGA AATGAAGCAA AGACCTCAAC ATTTAGCAGA GGCATTAAGT
AAAAAGAAAG TATTATATAT ATATAGAAGC GATGTAAAAA ATGATAACAT TTATTCAATT
AAAAAGATAA AGGACAATTT GTATGTTCTT AATTTAGATA TGTATAGTTT AAATGTGGCA
TTTTTTGAGG CAATAAAATC AATTAATAAG CCTAAATTTG TACATGTTTA TGCTACATGT
TTAAACTCAG TTGATTACGA AAAGATAAAA ACATATATGA ATAAAGGCTT TAAAGTCATA
TATGATTTTG TAGACGAGTT ATCTAGTGAA ATAAGTGGAT ATAACATAAC TTCTAAAATG
ATAGAGGATC ATGAAAAACT CTTGAGAGAT AAAGAAAATG TATTAGTTGT TTCAACTGCA
AAAAAATTAA AAGATATTGC AAATAAATTT AGGGGAGAAA ATGAAAATAA TATTTTAGCT
CCTAATGCTG TTAATTTAGA AGATTTTAAA AATCATGGAA ATGAAATAGG TGAAAAAATT
CAGCCTATAG TTAATAAAAG AAAGCCTATA ATAGGTTATT ATGGAGCTTT AGCTAAGTGG
GTTGATTATA AATTAATTGA AGAATTAGCA AAGGAAAGAG AAGATTACGA AATAGTTTTA
ATAGGAATGG ATTATGATGG GTCTTATGAT CAAAGTAATT TAAAAAATTA TTCAAATATA
TCTTATCTTG GTATGATTGA CTATAAATAT TTAATAAATT ATTCAAGATA TTTTGATGTA
TGTATTGTAC CTTTTATAAA AAATGATATA ACTGATTCTA CATCACCATT AAAAATATTT
GAGTATATGG CTTTAGAAAA GCCCATAGTA ACCACTGATA TAAATGAATG TAAAAATTAT
GAATCTTGTT TGATTTCAAA GGATTATGAT GAATTTATAA GAAATATTGA TAAGGCCTTA
AAACTAGAAA TAGATAACAA AGAATATTTT AATATCTTAA GAAGAGAAGC TGAAGAAAAT
ACCTGGGATA ATAGAGCTGA ATTAATAAAA GAGGCTATTA AAAACCTAGA ATAA
|
|---|
| Protein sequence | MSNIFEVMLK KNIGDFTYEE KRELNNWLIE NLKLKELIYS GLELTKVINE DGEETAYYEN
KITEEDILSG NFNELCYKTS KYIDDAISSI LFEGQFNCFY EKIKSILELE DFDEIIVFHA
SFGWNIEMKQ RPQHLAEALS KKKVLYIYRS DVKNDNIYSI KKIKDNLYVL NLDMYSLNVA
FFEAIKSINK PKFVHVYATC LNSVDYEKIK TYMNKGFKVI YDFVDELSSE ISGYNITSKM
IEDHEKLLRD KENVLVVSTA KKLKDIANKF RGENENNILA PNAVNLEDFK NHGNEIGEKI
QPIVNKRKPI IGYYGALAKW VDYKLIEELA KEREDYEIVL IGMDYDGSYD QSNLKNYSNI
SYLGMIDYKY LINYSRYFDV CIVPFIKNDI TDSTSPLKIF EYMALEKPIV TTDINECKNY
ESCLISKDYD EFIRNIDKAL KLEIDNKEYF NILRREAEEN TWDNRAELIK EAIKNLE
|
|---|
| |