| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0258 |
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| Symbol | |
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| ID | 4205608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 317657 |
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| End bp | 318838 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642564816 |
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| Product | teichoic acid ABC transporter, ATP-binding protein |
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| Protein accession | YP_697589 |
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| Protein GI | 110802786 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.591721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAGG CAATAGAAGT AAAAAATCTT TGTAAAAATT ACAGAGTTTA TGATTCAAAA
TCAAGTAGAA TAAGAAACAT AATAAATCCT TTTGCAAAAA AAGAAGTTAA AGAGTTTAAA
GCCTTAACTG ATGTTTCTTT TCATGTAAAT AAGGGTGAAA TAGTAGGTAT CATTGGAAAT
AATGGTGCTG GTAAATCTAC TTTGTTAAAA ATATTAACAG GAGTTTCATT TCCATCATCA
GGAGAAGTTA ATGTTAATGG AAGAGTATCT TCTCTTTTAG AATTAGGAAC TGGTTTTAAT
CCAGAGCTTA CTGGAGAAGA AAATATATAT TTTAATGGAA GTCTAATGGG ATTAACTCAA
GATGAAATTG ATAAGGTAAA GGATAATATT ATAGAGTTTG CTGATATTGG AGAATTTATA
AATCAACCAG TAAAAAGTTA CTCAAGTGGT ATGTATGCTA GATTAGCCTT TGCCGTTGCT
ATAAATATTA ATCCAGATAT ACTTATTGTA GATGAGATAT TATCCGTTGG AGATGTTGGA
TTCCAAAAAA AATGTATGGA TAAGTTTAAT GAATTTAAAG AGGCTGGTAA AACAGTTCTT
TATGTATCAC ATGGCCTTGA AACTGTTCAA ACCTTCTGTG AAAGAGCTAT ATGGCTTGAA
AAAGGAAGGG TAGTTGATAT TGGACCATCC TTTGATATAG TTGAAAAATA TTATGATAAG
CTTATGAAAA GTGATGATAA AGAAGAGCTT GAAACAGGAA AGTTTGTTGA GCTTATAAAT
GTGGAAATAT TAGATGATAA AAAAGTTTAT AAAAAGGGCG AATCTATAGA ATTTTTAGTT
GAATATGAGG TGTTTAATCC ATCAGTTAAA AATGCTGGTA TTACTATTGA AATGAGAAAG
GCATACAGAG AGCCTTGTGA ATATAGAAAT GCAGATCAGT TTATATTCTC AGTAAATAGT
AATGTTGATG AATTCACTAT ACCTTGGAAA AAGGGAAGAA ATAAAATTAC TTTTAAAATT
GATTCTCTAG ATGTTAAGGA AGGAATTTAT TATTTAGATG CTATATTTTC AGAAAGCCAA
AATCTTGTTG CTTTAGAAAC ACAAGAAGAC GTAGTTTCAT TTGAGGTGAA AAATGAAGGA
GAGTCTGAAG GTTTTGTATT CTTAGATTCT ACATGGACAT AA
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| Protein sequence | MEKAIEVKNL CKNYRVYDSK SSRIRNIINP FAKKEVKEFK ALTDVSFHVN KGEIVGIIGN
NGAGKSTLLK ILTGVSFPSS GEVNVNGRVS SLLELGTGFN PELTGEENIY FNGSLMGLTQ
DEIDKVKDNI IEFADIGEFI NQPVKSYSSG MYARLAFAVA ININPDILIV DEILSVGDVG
FQKKCMDKFN EFKEAGKTVL YVSHGLETVQ TFCERAIWLE KGRVVDIGPS FDIVEKYYDK
LMKSDDKEEL ETGKFVELIN VEILDDKKVY KKGESIEFLV EYEVFNPSVK NAGITIEMRK
AYREPCEYRN ADQFIFSVNS NVDEFTIPWK KGRNKITFKI DSLDVKEGIY YLDAIFSESQ
NLVALETQED VVSFEVKNEG ESEGFVFLDS TWT
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