| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0211 |
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| Symbol | |
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| ID | 4206503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 265826 |
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| End bp | 266389 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642564768 |
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| Product | sortase family protein |
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| Protein accession | YP_697546 |
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| Protein GI | 110803439 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAATA AACTAGCTAA AGGTTTATTT ATTTTAGGTT TAGTTATAGT TTCTACAGTT
CTTATAGGAA AACTTTATAA AAGTAGTATT GAGAAGAAAA CTTTAGAAGA GTTTAAGGAA
AAGTTTAATT ATTCAGAAGA AGAGAAGAAA AAGACTTTAG AAGAAATAAA AAATGGAGAT
GGAATAGCTT TAATAGATAT AGAAAAAATA GGTGTACACA CAGTTATTGC TGAAGGTAGT
ACCTTAAATG TGTTAGAAAA TAACATTGGT CACTTTGAAA ATACTGCTAT GCCAGGCGAA
AATGGAAATT TTAGTATTGC AGGACATAGA AATACTATAA ATAATGAGGT CTTTAGAAAT
ATAGACAAGC TTCAAGTGGG AGATGAAATA AAAATCACAA CGTTAACTGA CATATTTCAG
TATGAAATTA ATGAGATTTT TGTCACCTCA CCTAGTGATA CTGATGTTTT GAATCAAAAT
TTAGATGAGA AAACAATGAC AATAGTTACA TGTACAAATA GAGGAAAAGA CAGATATATA
GTTAAAGCAA AATTAATAGG TTAG
|
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| Protein sequence | MRNKLAKGLF ILGLVIVSTV LIGKLYKSSI EKKTLEEFKE KFNYSEEEKK KTLEEIKNGD
GIALIDIEKI GVHTVIAEGS TLNVLENNIG HFENTAMPGE NGNFSIAGHR NTINNEVFRN
IDKLQVGDEI KITTLTDIFQ YEINEIFVTS PSDTDVLNQN LDEKTMTIVT CTNRGKDRYI
VKAKLIG
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