Gene CPR_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0179 
Symbol 
ID4204629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp219431 
End bp220270 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content28% 
IMG OID642564734 
ProductRpiR family transcriptional regulator 
Protein accessionYP_697516 
Protein GI110802554 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.912597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATAT TAGAACAATT AGAAAATCCA AAATTTAAAG CAACTAAGTC AGAAAAGACA 
TTAATTGAAT ATATAAAGTC AGATTTAGAC AATATTATAT ACAAATCAAT ATCTATAATA
GCTAAGGAAT CAGGAGTAGG AGAAGCTACC ATAACAAGGT TTACTAAGAA GTTGGGGTTT
AATGGATTCC AAGACTTTAA AGTTACTTTA GCAAAGGAGA TCTCAAACAA AAAAAATACA
AGCATTATAA ATTTGCATGT TCATAGGGAT GAGAGTGTAA CAGAAACTGC AAATAAGATG
TTAAAATCAT CTATTAATAT ATTAGAGCAA ACAGTTAAGC AGATTGATTT AGATTTAATG
TGCAAATGCA GAGATTTAAT AATGAATGCT AAGAGAGTTT ATTTCATAGG TATAGGTTAT
TCAGGAATAG CTGCTACAGA TATAAACTAT AAATTCATGA GAATTGGATT TACAACAGTA
CCAGTAACTG ATAGCCATAC AATGGTTATT ATGTCATCTA TAACAAATGA TGATGATGTA
ATAGTTGCTA TTTCAAACTC AGGTACTACT AAAGAAGTAA TAAAAACTGT AAAACAAGCT
AAAGAAAATG GCACAAAGAT AATAACTTTA ACAGAAGATA GTGATAATCC ATTAAGAAAG
TTATCTGATT ATGAATTGAC ATATAAATCA GCTGAGACAA TTTTTGAGAC AGGATCAATA
TCATCAAAAA TACCACAAAT ATTTTTATTA GATCTATTAT ATACAGAGGT AATTAAAGAA
ATGTTTAGTG AGGCTGTTGA AAAGAAAATC AAGACTACTA GTGCAATTCT TAATGATTAA
 
Protein sequence
MGILEQLENP KFKATKSEKT LIEYIKSDLD NIIYKSISII AKESGVGEAT ITRFTKKLGF 
NGFQDFKVTL AKEISNKKNT SIINLHVHRD ESVTETANKM LKSSINILEQ TVKQIDLDLM
CKCRDLIMNA KRVYFIGIGY SGIAATDINY KFMRIGFTTV PVTDSHTMVI MSSITNDDDV
IVAISNSGTT KEVIKTVKQA KENGTKIITL TEDSDNPLRK LSDYELTYKS AETIFETGSI
SSKIPQIFLL DLLYTEVIKE MFSEAVEKKI KTTSAILND