Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0163 |
Symbol | mscL |
ID | 4205133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 202649 |
End bp | 203116 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564718 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_697500 |
Protein GI | 110803206 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAG AATTTAAAGA GTTTGCCATG AAAGGAAATG TAATAGACCT AGCTATTGGT GTTATTATAG GTGGCGCTTT CGGAAAAATT GTAACTTCAT TAGTAAATGA TATTATAATG CCTGTAATTG GTAGATTAGT TGGAAAAGTT GACTTCTCTA ACCTATACAT AAACTTAAGT GGACAACAAT TCAACTCATT ACAAGAAGCT CAAGCTGCTG GTGCTGCTAC TATAAATTAC GGACTATTTT TAAATAACTT AATTAACTTC TTAATAATAG CATTTTCTAT ATTTATAGTG ATAAAACAAA TAAACAAGCT TAAAAACTTC ACTAAGAAAA AAGAAGAAGT TCAAGTTGAA GCTACAGAAA AGGATTGTCC TTATTGCTGT ACTAAAATAG ACATAAAAGC TACTAGATGT CCTCATTGTA CATCTGTTTT AGAAGAAGCT ACTAATCAGT CTTCATAA
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Protein sequence | MWKEFKEFAM KGNVIDLAIG VIIGGAFGKI VTSLVNDIIM PVIGRLVGKV DFSNLYINLS GQQFNSLQEA QAAGAATINY GLFLNNLINF LIIAFSIFIV IKQINKLKNF TKKKEEVQVE ATEKDCPYCC TKIDIKATRC PHCTSVLEEA TNQSS
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