Gene CPR_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0163 
SymbolmscL 
ID4205133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp202649 
End bp203116 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content30% 
IMG OID642564718 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_697500 
Protein GI110803206 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAG AATTTAAAGA GTTTGCCATG AAAGGAAATG TAATAGACCT AGCTATTGGT 
GTTATTATAG GTGGCGCTTT CGGAAAAATT GTAACTTCAT TAGTAAATGA TATTATAATG
CCTGTAATTG GTAGATTAGT TGGAAAAGTT GACTTCTCTA ACCTATACAT AAACTTAAGT
GGACAACAAT TCAACTCATT ACAAGAAGCT CAAGCTGCTG GTGCTGCTAC TATAAATTAC
GGACTATTTT TAAATAACTT AATTAACTTC TTAATAATAG CATTTTCTAT ATTTATAGTG
ATAAAACAAA TAAACAAGCT TAAAAACTTC ACTAAGAAAA AAGAAGAAGT TCAAGTTGAA
GCTACAGAAA AGGATTGTCC TTATTGCTGT ACTAAAATAG ACATAAAAGC TACTAGATGT
CCTCATTGTA CATCTGTTTT AGAAGAAGCT ACTAATCAGT CTTCATAA
 
Protein sequence
MWKEFKEFAM KGNVIDLAIG VIIGGAFGKI VTSLVNDIIM PVIGRLVGKV DFSNLYINLS 
GQQFNSLQEA QAAGAATINY GLFLNNLINF LIIAFSIFIV IKQINKLKNF TKKKEEVQVE
ATEKDCPYCC TKIDIKATRC PHCTSVLEEA TNQSS