Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0155 |
Symbol | |
ID | 4204782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 188938 |
End bp | 190425 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642564710 |
Product | amino acid permease |
Protein accession | YP_697492 |
Protein GI | 110802239 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA GAAAAAGGTC GCTTAGTTCA GGAGCTTTAA TGCTTATGAC ATTTACAGCG GTATTTTCAT TCGGAAACAT AATTGATAGT AGTGTAAATA TTGGACTAGC TACAATACCA TCATACATAT TTGGTACAGT ATTTTACTTT TTACCATTTG CTTTGATGAT TGGTGAGTTT GCTTCAGCTA GTTCAGATTC TGAATCAGGT ATAAATAGTT GGATAAAGAA ATCTTTAGGA GCAAGATGGG CTTTCTTAGG ATCATGGTCT TATTTCTTTG TTAACTTGTT CTTCTTTACT TCACTATTAC CTAAAATATT AATTTATGCA TCTTATACAT TTGTTGGTAG AAATGTATTT GATGGAAAAA CAGTATTAAT TTCTGTTATA TCAATAGTAT TATTCTGGGC AGTAACTATA ATTTCTACTA AGGGTGTATC TTGGATTTCA AAAATAACAA GTATATCTGG TGTAGCTAGA ATAATTTTAG GGTTAGGCTT CATAGTATTA TCTTTCGGAG TTATTTTATT CTTAGGAAAA GCTCCAGCTC AAGAATTCAC AGCAGAAACT ATTATGCCTA AGTTTAACTG GTCATATTTC ATGGTTTTAG CTTGGATTTT ACAAGCAGTA GGTGGTGCTG AAAGTATAGG AGTATATATT AAAGACGTAA AGGGTGGAAA TAAAACATTC ATAAGAACAA TGGTAATTTC AACTGCTATA GTTGGTGGTT TATATGCACT TGGAGCTGTT TCAGTAGGTT TAGTTGTACC TTCAGAAGTA TTACAAGGTA ATTTCTCAAA TGGTTTATTT GATGCCTTTG CAATATTAGG TGCAAACTAT GGAGTAGGTA ACATAATAAC TAACATAGTT GGATTCATAA TGATGCTTGC CTCTTTAGGT TCATTAGTTT TATGGACTGC AGCACCTGTT AAAGTATTAT TCTCTGAAAT TCCTGAAGGA ATCTTTGGTA AATGGATTGC TAAAACAGAT AAAAAAGGAA CTCCTGTAAA TGCTTTATAT GTACAAGCTG TAATAGTAAC AGTATTACTA TTAGTACCAG CTTTAGGAAT AGGTTCAGTT GATAGCTTAC TTGAAATGTT AATAAACATG ACTGCTTCAA CTTCATTAAT TCCAGTATTA TTCTTCTTAG TTGGATACAT TGTATTAAGA GCTAAGAAAG ATGATATGGA AAGATCATTT AAAGTTGGAT CTAAAAACTT TGGAATAGCA ATTGGAGTAT TATTACTTGC TTTATTCGTA TTCGTATTTG TAATATCTTC AATTCCAGCT CCACAAGACT TTGCAGCTTA CTTTAATGGA ACACTAGCAG AAGGAGCAAC AAATCCTGTA TTTGTACTTT TATACAATGT ATTAGGATTA GTATTCTTCT TAGGTTTTGC TGAAATTTGC TGGAGAAAAT ATGAAAAGAA AGTTGGAAAA GCTGTAGCTA ATGAATGGGA TCAAGAAGAG GTTTCAGAAA TAGCTTAA
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Protein sequence | MSERKRSLSS GALMLMTFTA VFSFGNIIDS SVNIGLATIP SYIFGTVFYF LPFALMIGEF ASASSDSESG INSWIKKSLG ARWAFLGSWS YFFVNLFFFT SLLPKILIYA SYTFVGRNVF DGKTVLISVI SIVLFWAVTI ISTKGVSWIS KITSISGVAR IILGLGFIVL SFGVILFLGK APAQEFTAET IMPKFNWSYF MVLAWILQAV GGAESIGVYI KDVKGGNKTF IRTMVISTAI VGGLYALGAV SVGLVVPSEV LQGNFSNGLF DAFAILGANY GVGNIITNIV GFIMMLASLG SLVLWTAAPV KVLFSEIPEG IFGKWIAKTD KKGTPVNALY VQAVIVTVLL LVPALGIGSV DSLLEMLINM TASTSLIPVL FFLVGYIVLR AKKDDMERSF KVGSKNFGIA IGVLLLALFV FVFVISSIPA PQDFAAYFNG TLAEGATNPV FVLLYNVLGL VFFLGFAEIC WRKYEKKVGK AVANEWDQEE VSEIA
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