| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0146 |
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| Symbol | |
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| ID | 4204106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 179660 |
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| End bp | 180481 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642564701 |
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| Product | sortase family protein |
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| Protein accession | YP_697483 |
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| Protein GI | 110801689 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGGC TAAAAAGAAT ATATTTTTCT ATTTTAATTT TGATTACACT TATTGCTCTA
GGATTTTTGT TATATCCTAG TTTTTCTAAT TACATAAATA ATAAATTTGC AGTTTCTACA
ATTTCTGATT ATACAGAGAA GATAAATAAT GTTAAGGATG AAGAAGTTGA TGATTTAATA
AAAAATATTA ATAAGTATAA TTATGATTTA TTTAATGGAA CTGCTGAAAA TCAATTGCCA
GATTACTTAA ATATTCATGA AGGGGATGTC TTAGGGTACA TAGAAATTCC TAGTATAAAT
ATTAAGTTAC CTATATACTA TGGAACTTCA GTTGATATTT TGAAAAAAGG AGTTGGAGTT
TTAGAGGGGA CATCACTTCC TGTAGGAGGG GAAAATACTC ATTCAGTTTT ATCAGCTCAT
ACTGGATTAG CAAATCAAAA ACTTTTTACT GATATAGACA AACTAAAAGA TGGAGATGTT
TTTTATTTGC ATATTTTAAA AAAGGATCTT GCTTATAAAG TGAATCAAAT AAAAGTTGTT
CACCCAGATG AAATTGATGA ACTGAAAATA TCAGATGACA AGGACTATGT AACTTTACTA
ACTTGTTATC CTTATGGGAT TAATACTGAA CGTTTATTAG TAAGGGGAGA GAGAACGGAT
TTAAGTCCAA GTAATGTAGA GCAGGTTCAA AAGGAAATAA GCACTTTTAA TCATTCAAAT
GAAAATTTAA TACTAATAGT TATAATATTA AATTCAGTGC TAATAATTAT TTTCTTATTG
TTTTTAATTA TGAAATTTAA AGGGAAAAAT AAGAGTAGAT AA
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| Protein sequence | MKRLKRIYFS ILILITLIAL GFLLYPSFSN YINNKFAVST ISDYTEKINN VKDEEVDDLI
KNINKYNYDL FNGTAENQLP DYLNIHEGDV LGYIEIPSIN IKLPIYYGTS VDILKKGVGV
LEGTSLPVGG ENTHSVLSAH TGLANQKLFT DIDKLKDGDV FYLHILKKDL AYKVNQIKVV
HPDEIDELKI SDDKDYVTLL TCYPYGINTE RLLVRGERTD LSPSNVEQVQ KEISTFNHSN
ENLILIVIIL NSVLIIIFLL FLIMKFKGKN KSR
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