Gene CPR_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0113 
Symbol 
ID4205633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp142715 
End bp143674 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content27% 
IMG OID642564668 
ProductN-acetylmuramoyl-L-alanine amidase domain-containing protein 
Protein accessionYP_697450 
Protein GI110803411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TTTTAAGAAT TTTATCTATT ATAATTATTT CCTCTTTAAT GCTATTAGGT 
TGTGGATCAA ATTCCACTAA ACCAAATATT AATAAGGACT CTAATAGTAT TAATAATTCC
AATGAGGAAA ATAACAAGAT AGAAAAAAAT AACTCTAATA ATAAAAATAA TTCTATAGAT
GAAAATAATA ATAAAGAAAA AAATGATTCT AAAGAAGGAA ACATAGACCA AAAAAAAGAA
AAAAATAAAA TTGATTCTAA TACTAGTAAG GAAACTGATA AAAAAAGTGA TGTAGAACCT
TATTGTGAAA ATGAACCTAA TAAAGCTAAT AAAGATATAA CTATAGTTAT TGATCCAGGG
CATTCTAGTA CAATATCTAA TGAAACAGAA CCTGAATGTC CAGGCTCACA AAAAAGAAAA
TTAAAAGATA CCTTAGGTGC TATAGGAGTT CAAAGTAAAA TTCCAGAATA CACAATAACT
CATGGTGTAG CTGAAGAATT AAAAAAACTT CTTACTTCTG AAGGGTATAA TGTAATTATG
ACTAAAGATA GTCCTGACAA GCAGCTTAGC AATATAGAAA GAACCACTAT TGGTAATGAT
AATAATGCAA ATTTAATTAT AAGGATTCAC TGTGACGGAG TTGATTCTCC TAAGGCTTGT
GGTGCTTCTA TACTAGTTCC TGCTACAAAA GGAAATGTAA CAAAAGATAT ATCAGATATA
AGCTATTCAT ATGGAGAAAA AATACTAACA GCATATACAA AATATACAGG ATTAAAAAAT
AGAGGTGTTG TTGTAAGAGA TGATTTAACT GGTTTTAACT GGTCAAAAGT TCCTATTGTA
CTTATAGAAT TAGGGTTTAT TTCCAATCCT AATGAAGATT TATATTTAAG TAATCCAGAT
AATTATATAA AAATTGCAAC TGGAATCTCT AACGGAATTA ATTACTGTTT TGCAAAATAA
 
Protein sequence
MKNFLRILSI IIISSLMLLG CGSNSTKPNI NKDSNSINNS NEENNKIEKN NSNNKNNSID 
ENNNKEKNDS KEGNIDQKKE KNKIDSNTSK ETDKKSDVEP YCENEPNKAN KDITIVIDPG
HSSTISNETE PECPGSQKRK LKDTLGAIGV QSKIPEYTIT HGVAEELKKL LTSEGYNVIM
TKDSPDKQLS NIERTTIGND NNANLIIRIH CDGVDSPKAC GASILVPATK GNVTKDISDI
SYSYGEKILT AYTKYTGLKN RGVVVRDDLT GFNWSKVPIV LIELGFISNP NEDLYLSNPD
NYIKIATGIS NGINYCFAK