Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0113 |
Symbol | |
ID | 4205633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 142715 |
End bp | 143674 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642564668 |
Product | N-acetylmuramoyl-L-alanine amidase domain-containing protein |
Protein accession | YP_697450 |
Protein GI | 110803411 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TTTTAAGAAT TTTATCTATT ATAATTATTT CCTCTTTAAT GCTATTAGGT TGTGGATCAA ATTCCACTAA ACCAAATATT AATAAGGACT CTAATAGTAT TAATAATTCC AATGAGGAAA ATAACAAGAT AGAAAAAAAT AACTCTAATA ATAAAAATAA TTCTATAGAT GAAAATAATA ATAAAGAAAA AAATGATTCT AAAGAAGGAA ACATAGACCA AAAAAAAGAA AAAAATAAAA TTGATTCTAA TACTAGTAAG GAAACTGATA AAAAAAGTGA TGTAGAACCT TATTGTGAAA ATGAACCTAA TAAAGCTAAT AAAGATATAA CTATAGTTAT TGATCCAGGG CATTCTAGTA CAATATCTAA TGAAACAGAA CCTGAATGTC CAGGCTCACA AAAAAGAAAA TTAAAAGATA CCTTAGGTGC TATAGGAGTT CAAAGTAAAA TTCCAGAATA CACAATAACT CATGGTGTAG CTGAAGAATT AAAAAAACTT CTTACTTCTG AAGGGTATAA TGTAATTATG ACTAAAGATA GTCCTGACAA GCAGCTTAGC AATATAGAAA GAACCACTAT TGGTAATGAT AATAATGCAA ATTTAATTAT AAGGATTCAC TGTGACGGAG TTGATTCTCC TAAGGCTTGT GGTGCTTCTA TACTAGTTCC TGCTACAAAA GGAAATGTAA CAAAAGATAT ATCAGATATA AGCTATTCAT ATGGAGAAAA AATACTAACA GCATATACAA AATATACAGG ATTAAAAAAT AGAGGTGTTG TTGTAAGAGA TGATTTAACT GGTTTTAACT GGTCAAAAGT TCCTATTGTA CTTATAGAAT TAGGGTTTAT TTCCAATCCT AATGAAGATT TATATTTAAG TAATCCAGAT AATTATATAA AAATTGCAAC TGGAATCTCT AACGGAATTA ATTACTGTTT TGCAAAATAA
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Protein sequence | MKNFLRILSI IIISSLMLLG CGSNSTKPNI NKDSNSINNS NEENNKIEKN NSNNKNNSID ENNNKEKNDS KEGNIDQKKE KNKIDSNTSK ETDKKSDVEP YCENEPNKAN KDITIVIDPG HSSTISNETE PECPGSQKRK LKDTLGAIGV QSKIPEYTIT HGVAEELKKL LTSEGYNVIM TKDSPDKQLS NIERTTIGND NNANLIIRIH CDGVDSPKAC GASILVPATK GNVTKDISDI SYSYGEKILT AYTKYTGLKN RGVVVRDDLT GFNWSKVPIV LIELGFISNP NEDLYLSNPD NYIKIATGIS NGINYCFAK
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