Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0087 |
Symbol | glgD |
ID | 4206157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 103595 |
End bp | 104701 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642564636 |
Product | glucose-1-phosphate adenylyltransferase, GlgD subunit |
Protein accession | YP_697426 |
Protein GI | 110803751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02092] glucose-1-phosphate adenylyltransferase, GlgD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT GCATAGGTAT AATAAATTTA GATGAGAATG AAAGCAAAAT TGGAGAATTA GTAAAAAATA GGCCTTTAGC AGCAGTACCT ATAGCAGGAA GATATAGAAT AATTGATTTT ATACTTTCTA ATATGACCAA TGCAGGAATA GAATCTTTAG GCATTTTAAG TAAAAATAAA TCGCGTTCAT TAGTAGATCA TTTAACTAAT GGTAGACCAT GGGATTTGCA CAGAAAAAGA GATGGGTTAA GAGTATTTAA TTTTGGAGAA AGAGATCCAT ATTATGATGA TATAACTAAT CTTTATGAAA ATTTAGAGTT TTTAACTAAA AGTAGAAGAG AATACGTTAT TATGTCACCT TCATATATGA TTTGTAATAT AGATTTAAAA GAAGCTTTAG AATATCATAA GAAAAATGAT AATGATATTA CAGTAATATA TAAAAAAGTT AAAGATGCAG ATTCTAATTT TATTGATTGT GATGTTTTAA ATTTTGATGA ATGTGGATTT ATAAAAAGTA TAGGAAAAAA TTTGGGTAGA GAAGAAGAAA GTAGCATAAG TTTAGAAATG TATATATTAA GAACAGATCT TCTAATAGAA ATAATATATG AATGTATAAG AAGAGGTTCT CATAGAAAAT TTAAAAGTTA TTTAAAGGAA TTCTTAGATG AAATTAAGGT TGGTGGATTT GAATTTAAAG GTTATTTAAG TTGTGTTAAT TCACTAAAAT CTTATTACAA GGCTAATATG GATTTATTAG AAGAGAAGGT TTATAAGGAA TTATTTATAG ATAATAATCC TATATATACT AAATCTAGAG ATGAAGGACC GACACATTAT ACTAAAAATA GTGAAGTAAC TAATTCGATA ATAGCAAATG GTTCTTATAT TGAAGGGAAA GTTGAAAACA GTATAATTGG AAGAAGAGTT TATGTAGGAC CAGAGGCAGT TATTAAAAAT TGTATTATAA TGCAAGAAAC TGTTATAGGT GAAAATGCCC ATTTAGATAA AATAATAACA GATAAGGCAG CGGTAATAAG AGATGATGAT AAAATAGTAG GTCTTGAATA CTGTCCTATG GTTTTAAGCA AACCTAATGT AATATAA
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Protein sequence | MNNCIGIINL DENESKIGEL VKNRPLAAVP IAGRYRIIDF ILSNMTNAGI ESLGILSKNK SRSLVDHLTN GRPWDLHRKR DGLRVFNFGE RDPYYDDITN LYENLEFLTK SRREYVIMSP SYMICNIDLK EALEYHKKND NDITVIYKKV KDADSNFIDC DVLNFDECGF IKSIGKNLGR EEESSISLEM YILRTDLLIE IIYECIRRGS HRKFKSYLKE FLDEIKVGGF EFKGYLSCVN SLKSYYKANM DLLEEKVYKE LFIDNNPIYT KSRDEGPTHY TKNSEVTNSI IANGSYIEGK VENSIIGRRV YVGPEAVIKN CIIMQETVIG ENAHLDKIIT DKAAVIRDDD KIVGLEYCPM VLSKPNVI
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