Gene CPR_0086 details

Gene Information

• Locus tag: CPR_0086
• Symbol: glgC
• ID: 4206378
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 102399
• End bp: 103565
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 642564635
• Product: glucose-1-phosphate adenylyltransferase
• Protein accession: YP_697425
• Protein GI: 110803507
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0448] ADP-glucose pyrophosphorylase
• TIGRFAM ID: [TIGR02091] glucose-1-phosphate adenylyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAAAAA AAGAGATAGT TGCAATGATA TTGGCTGGGG GTCAAGGATC TAGATTAGGT 
GTATTAACTA AAAATTTAGC TAAGCCAGCA GTTCCTTTTG GAGGAAAATA TAGAATAATA 
GATTTTCCTT TAAGTAACTG TTCTAATTCA GGTATATATA CTGTTGGTGT TTTAACACAG 
TATAAGCCTT TAAAATTAAA TGAACATATT GGTATTGGTG ATACATGGGA TTTAGATAGA 
AGAGATGGAG GGGTAAGTAT ATTGCCTCCT TATCAAAAAG AAAAAGGCGG AGATTGGTAT 
AAAGGAACTG CTAATGCAAT TTATCAAAAT ATTGAATTCA TAGAAAGATA TGACCCAGAA 
TATGTTCTTA TTTTATCAGG AGATCATATT TATAAAATGG ATTATGATAA AATGTTAGAA 
ATGCATAAAC AAAAAGAAGC TGATGCTACT ATAGCAGTAA TAAATGTTCC TATGCATGAG 
GCTAGTAGAT TTGGAATAAT GAATACAAAT GAAGATCTAT CAATATATGA GTTTGAAGAA 
AAGCCAGAAC ATCCAAAGAG TACAAATGCT TCAATGGGAA TATATATATT TAATTGGAAA 
ATTTTAAAGA AATTTTTAGA AGAGGATGAG TTAGATCCAA GTTCAAGCAA TGATTTTGGA 
AAAAACATAA TTCCTAAAAT GTTGAATTCA GGAAAAAAAC TTATAGCATA TCCATTTAAT 
GGTTATTGGA AAGATGTTGG AACTATAGAG AGTTTATGGG AAGCTAATAT GGATTTACTA 
AAGTATGAAG ATGAATTAAG TCTTTATGAT AGTGAATGGA AAATTTATTC TGCAAATCCA 
GTTAGACCTG CTCAATTTAT TGGAAAAGAT GCAGAAATAA AGTCGTCATT AACGGTTGAA 
GGATGTATAG TACATGGTAA GGTGGAAAAT TCAGTTTTAT TTCAAGGTGT ATATGTGGGA 
AAAGGAGCTA TAGTTAAAGA TGCTGTAATA ATGCCAAATA CAAAAATTGA AGATAATGTT 
TTAATAGAAA AAGCTATTAT AGGTAGTGAA GCTATTGTTT GTAAAGGATG TAAAATAGGA 
GATGGAAATA AAATTTCTGT AATAGCATCT AAAGAAGTTG TTATAGGTAG TAAAGAAATA 
ATAGAAGAAT GTGCTATGGT AAAGTAG 

 

Protein sequence

MSKKEIVAMI LAGGQGSRLG VLTKNLAKPA VPFGGKYRII DFPLSNCSNS GIYTVGVLTQ 
YKPLKLNEHI GIGDTWDLDR RDGGVSILPP YQKEKGGDWY KGTANAIYQN IEFIERYDPE 
YVLILSGDHI YKMDYDKMLE MHKQKEADAT IAVINVPMHE ASRFGIMNTN EDLSIYEFEE 
KPEHPKSTNA SMGIYIFNWK ILKKFLEEDE LDPSSSNDFG KNIIPKMLNS GKKLIAYPFN 
GYWKDVGTIE SLWEANMDLL KYEDELSLYD SEWKIYSANP VRPAQFIGKD AEIKSSLTVE 
GCIVHGKVEN SVLFQGVYVG KGAIVKDAVI MPNTKIEDNV LIEKAIIGSE AIVCKGCKIG 
DGNKISVIAS KEVVIGSKEI IEECAMVK