Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0063 |
Symbol | |
ID | 4204446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 66565 |
End bp | 67641 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564606 |
Product | aminotransferase, class V |
Protein accession | YP_697405 |
Protein GI | 110802391 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATAAAA AGTTATTTAT ACCAGGGCCT GTGGAAGTCA GAGAGGAAGT ATTAGAAAAA ATGGCTACTC CTATGATTGG ACATAGAAGT AAAGAGGCAT CTCAATTACA AAGAAGAATA AGCGATAATT TAAGGAAATT ATTTTTTACT AATAATGAAA TACTTTTATC AACAACTTCA GGAAGTGGAT TAATGGAGGG AGCTATAAGA AGTTGTACTT TAAAGAAGGC TGCTGTATTT TCTGTGGGGG CTTTTGGGGA TAGATGGTAT GAAATGGGGA TAAGTAATAA TGTTCCTGTG GATAAATTTG AAGTTCCTTG GGGAAAAAGT ATTAATGTAG ATTTAATTGA TTCAGTTCTT AAAACTGGAC AGTATGATTT AATAACAGTA ACTCATAATG AAACATCTAC AGGGGTTATG AATGATTTAG AAGCAATAAG CAAAGTTATA AGAAAATATC CAGAGGTTAT ATTCTGTGTT GATGCAGTTA GTTCTGCAGG TGGAAGTAAA ATAGAGGTGG ATAAACTTAA TATAGATATA TGTATTACCT CTTCACAAAA AGCTTTAGGG CTTCCTCCAG GAATATCAAT ATGTACATTT TCAGAAAAAG CTAGGGAAAG AGCAGAAAAA GTTAAGTTTA GAGGAACATA TTTAGATTTA TTAGCTTTAT ATAAATATAT TAAAAAGAAG GATTATCAAT ATCCATCAAC GCCTTCTATT TCACATATGT ATGCTTTAGA TTACCAATTA GATTATATAT TAAATGTAGA AGGGCTAGAA AATAGATTCA ATAGACATAT TGAAATGGCT AAAATAGTTA GAGAATGGGC AGAAAAATAC TTTGAAATTT ATCCTGAAAA GGGGTACTAT TCAAATACCC TTACAACCAT AAAAAATAAT AAAAATATAG ATATTGGGGC TTTAAATAAG GAACTTGGAA AAAGAGGATT TCAGATATCT AATGGGTATG GAAAGCTAAA GGATAAGACA TTTAGAATAG CACACATGGC TGACTGCCAA GTTAAAGATA TAAAAGAATT ATTAAGTAAT ATAAATGAAA TTTTAGAATT GGAATAA
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Protein sequence | MHKKLFIPGP VEVREEVLEK MATPMIGHRS KEASQLQRRI SDNLRKLFFT NNEILLSTTS GSGLMEGAIR SCTLKKAAVF SVGAFGDRWY EMGISNNVPV DKFEVPWGKS INVDLIDSVL KTGQYDLITV THNETSTGVM NDLEAISKVI RKYPEVIFCV DAVSSAGGSK IEVDKLNIDI CITSSQKALG LPPGISICTF SEKARERAEK VKFRGTYLDL LALYKYIKKK DYQYPSTPSI SHMYALDYQL DYILNVEGLE NRFNRHIEMA KIVREWAEKY FEIYPEKGYY SNTLTTIKNN KNIDIGALNK ELGKRGFQIS NGYGKLKDKT FRIAHMADCQ VKDIKELLSN INEILELE
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