| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0055 |
|---|
| Symbol | dnaX |
|---|
| ID | 4206235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 60816 |
|---|
| End bp | 62459 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642564598 |
|---|
| Product | DNA polymerase III subunits gamma and tau |
|---|
| Protein accession | YP_697397 |
|---|
| Protein GI | 110803673 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCATATA AAGCTTTGTA TAGAGAGTGG AGACCACAAA CCTTTAATGA TGTTGTAGGT
CAAGAACATA TAACCACTAC ATTAAAAAAT CAGATAATAA ATGAAAGAAC AGCTCATGCA
TATTTATTTT GTGGTACTAG AGGAACTGGT AAAACTTCTA CAGCTAAGGT AATGGCTAAG
GCTTTAAACT GTTTAGATTT AAAAGACGGA GAGCCTTGTA ATCAGTGTGA GATGTGTAAA
AAAATAAATG AAGGATTAGC AATAGATATA ACTGAACTTG ATGCAGCTTC AAACAATGGG
GTAGATAACA TAAGGGATAT AATTGATGAT GTTCAATATC CACCACAAGA AGCTAGATTT
AAAGTTTACA TAATGGATGA GGTTCACATG CTTTCTATTG GGGCAGTTAA TGCTTTTTTA
AAGACTTTAG AAGAGCCACC AAAGAATGTA GTCTTCATTT TAGCTACAAC AGATCCTCAA
AAATTACCTA TAACTATATT ATCAAGATGT CAAAGATTTG ACTTCAAAAG GATTAGTAGA
AAAGATATAA CAGGAAGATT AAGAAAAATA GTTACTGAGC AAGGGATATT CTGTGATGAT
AAAAGTTTAG ATCTTGTTGC AAGAGTATCT GATGGAGCTA TGAGAGATTC CTTAAGTATA
TTAGATCAAG CTATTTCTAT AGGGGATGGT AAGGTAGATT ATGATGAATT AGTTTCTATG
TTAGGACTTG TAACTAATGA TAATTTATTT AAAATAGTGG ATTCTATAAT AAAAAGAGAT
ATAGAAAGTG CTATGGAAAT AATAGAAGAA TTAGTTCTTA CAGGAAAGGA TATGACTCTT
TTCATAAAGG ACTTAATAGT TCATTATAGA AACTTGCTTA TGATAAAGGT AACTTCAAAT
CCAGAGGAAG TTTTAGATAC TGCTGAGGAA AATATAGAAA AACTTAAAGT GCAAGGTGCT
AAGTTAAAGG TTGAAGAAAT CATGAGATGC ATAAGAATTG TGCAAGAATG TGATGAAGAG
GCTAAACTTA GTAAACAGGC TAGAGTTTAT TTAGAGCTTG CAGTAATAAA AATGTGCAAA
ATAGAGTATG ATACATCTAA GGAAGTTATG CTAGCAAGAA TAAATAAGTT AGAACAAGCA
ATAAGAAGTG GAAATATACA GGTTAATACT AATTTAGAAG AGGTTAAATC ACAAGTTTCA
AATGAAGCTT CAAATAATAA AACTTTAAAT AATAAACAAC AGAATGTTAT AAAAAGTTCA
AATAATTATG AAGTGGTAAA TGAAAATTCA ACCCTAACAC CAGAGTATTT AAGAAAGGTT
TGGAAAGATA TACTTGAAAC TTTTAAGAGT AGAGGAAAGT ATATGGTTTA TATAGCCTTA
GCAAAGGGTA TAAGCAAAGT TTCTTGCAAT AAAGGTGTTG TTGAATTTAG ATATACTTAT
GAATATAGAC ATAATAAAGA AAGACTTGAA AAACATGATT TCTCTAAAAT AGTAAATGAT
ATATTTTCAG AAGTTTTAAA GGAACCTGTA AGAGTTGTAT ATAGTGTTGA ACAAGGAACA
GAAGAGGAAA AAGCTGAGGA AGCTGATTTA GAAGCTAGAC TTTCAGGTAT TATGGGTGAT
GGTCTAGAAA TAGTTGAAGA ATAG
|
|---|
| Protein sequence | MAYKALYREW RPQTFNDVVG QEHITTTLKN QIINERTAHA YLFCGTRGTG KTSTAKVMAK
ALNCLDLKDG EPCNQCEMCK KINEGLAIDI TELDAASNNG VDNIRDIIDD VQYPPQEARF
KVYIMDEVHM LSIGAVNAFL KTLEEPPKNV VFILATTDPQ KLPITILSRC QRFDFKRISR
KDITGRLRKI VTEQGIFCDD KSLDLVARVS DGAMRDSLSI LDQAISIGDG KVDYDELVSM
LGLVTNDNLF KIVDSIIKRD IESAMEIIEE LVLTGKDMTL FIKDLIVHYR NLLMIKVTSN
PEEVLDTAEE NIEKLKVQGA KLKVEEIMRC IRIVQECDEE AKLSKQARVY LELAVIKMCK
IEYDTSKEVM LARINKLEQA IRSGNIQVNT NLEEVKSQVS NEASNNKTLN NKQQNVIKSS
NNYEVVNENS TLTPEYLRKV WKDILETFKS RGKYMVYIAL AKGISKVSCN KGVVEFRYTY
EYRHNKERLE KHDFSKIVND IFSEVLKEPV RVVYSVEQGT EEEKAEEADL EARLSGIMGD
GLEIVEE
|
|---|
| |