| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0030 |
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| Symbol | |
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| ID | 4206338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 38590 |
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| End bp | 39465 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642564573 |
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| Product | degV family protein |
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| Protein accession | YP_697375 |
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| Protein GI | 110803370 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAAAT TTGTTTTATT TACTGATTCG GCAGCTGATC TGCCAAAAAG CATGGTAAAA
GATTTAGATA TTAATTATTT AGGACTTATA TGTAATATTG ATAATACAGA ATATATTGAT
AATATTGATA GCGAATTAAC TCCAAAAGCT TTCTATAATA AATTAAGAGA AGGTATCATG
CCATCAACAA GCCAAATAAA CTCATTTAGA TTTGTTGAAG CCTTTGAAGA ATATGTTAAA
CAAGGAATTT CTATTTTATA CTTAGCATTT TCATCAGCCC TAAGTGGAAC ATATAATAGT
TCACTTATAG CTAGAGAGGA ATTATTAGAA AAATATCCTG ATGCTGATAT AAAGATAGTA
GATACTAGAG CTGCATGCTT AGGCCAAGGA TTACTAGTTT ATTATGCTAC TCAAATGAAA
AAGGATGGAA AGTCTATAGA TGAAATCTAC TCTTGGGTAG AAGAAAACAA AAATAAGTTA
TGTCATTACT TTACAGTAGA TAGCTTAGAT CATTTAAAAA GAGGGGGAAG AATTTCATCT
ACAGCAGCAG CTATTGGTAG CTTATTAAGT ATAAAGCCAA TGCTATATGT AAATGATGCA
GGTGAACTTC ATAACTTTGC TAAGGCTAAA GGAAGAAAAA AATCTTTAAA AATGTTATTC
CAAGAGCTTG AAAAACGTAT TGTAAACCCT AATGAGCAAA CAATTTTTAT TGCTCATAGT
GATTGTATTG AAGATGCAGA AACTTTAGCA GAAATGATTA GAGAAAAATA TCCTGTAAAA
GACATACTTA TAGATTATAT AGGAATAGTT ATAGGTTCTC ATACAGGTAT AGGAACATTA
GCTGTCTTCT TCTTAGGAGA TACAAAAGAA CCTTAA
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| Protein sequence | MKKFVLFTDS AADLPKSMVK DLDINYLGLI CNIDNTEYID NIDSELTPKA FYNKLREGIM
PSTSQINSFR FVEAFEEYVK QGISILYLAF SSALSGTYNS SLIAREELLE KYPDADIKIV
DTRAACLGQG LLVYYATQMK KDGKSIDEIY SWVEENKNKL CHYFTVDSLD HLKRGGRISS
TAAAIGSLLS IKPMLYVNDA GELHNFAKAK GRKKSLKMLF QELEKRIVNP NEQTIFIAHS
DCIEDAETLA EMIREKYPVK DILIDYIGIV IGSHTGIGTL AVFFLGDTKE P
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