Gene CPR_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0028 
Symbol 
ID4205960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp35912 
End bp37072 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content26% 
IMG OID642564571 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_697373 
Protein GI110803943 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AAAAACTTTT AATTTCAATT TCTTTATCAA TATTTTTATT ATTAATTATA 
GTTGTTTCAT ACTTTATTTT CTCATACTCA AATAATTTAA ACAAATTTAA AGAGGATTTA
TCATCAAATA ATTATGAGGA TGCCGCCTAT TGTTTTAATA ATGGAACAAA AAGTATTATA
TTGAAAAAAA CTTTTATTAA ATCATCAGAA GATATAATTA CAGAAAAATT ATCAGAAATA
GAAAATGAGT ATTATTCTGG AGATATATCT GAAGAAGAAA CTGTAAAAGA TTTAAATGGA
CTATTATCAT TAAATACGTC TAATGAGGAA ATTTTTAATT TTAAAAACAC AATTCCTCTA
ATAAAAGATT CAAAGGACTC ATTTGATATT GGAATTTCTA AGCTAGATGA AGAAAATTAT
TTAGAAGCTT TAAACTACTT TAAAAGTGTA CATAATCTTT CAGATTGTAA AGCTCAAGCA
CTAGAATGTG AAGAAACTTG CTTAGATAAA ATAAGAGAAC CTATTTTAGA AACTGTAGAT
GAATATATAT CTAATGAAAA ATATTCAAAA GGAATAGAGT ATTTAGATTC TAAAATCAAT
TCTCTACCTG ATGATCCAAA ATTACAGGAA AAAAGAGATG AATTAGAAAA TCTTAGATTG
GAGCATCTTG AAGCTTATAG TCAAGAAAAT ATAGACAAAG CCACAGCTAG AACTGCTCCT
GTTATGGAAT ATTATAAAAA ATTAAATGAA GATACAATAA ATCAATTTGA TATAACTAGT
AACACTAATT ATTTGGTTTT CGTGAATATA GCTGAACAAA AAACTTATGT ATATGAAGGC
TCAAAAAATG ATTGGACTTT AGATAAGACA TTTACTTGTT CAACAGGTAT TGAAGGAAAG
GAAACTCCTG TAGGAATATT TACTGTACAA ACTAGAGCTC CTTGGTTTTT CTCACCTAAA
TACGGACAAG GTGGAAAATA CTATGTTCAA TTTATGGGTA ACTATTTATT TCACTCAATC
CCATTTAATT CTGATAAAAC TACAGTATCA GATCCAACTT TAGGGGTGCC AGCTTCCCAC
GGATGCATAA GATTATCAGT TGAAGATTCT AAATGGCTAT ATGATAATGT ACAAAATGGT
TCAAAAATAA TAATTTACTA A
 
Protein sequence
MKNKKLLISI SLSIFLLLII VVSYFIFSYS NNLNKFKEDL SSNNYEDAAY CFNNGTKSII 
LKKTFIKSSE DIITEKLSEI ENEYYSGDIS EEETVKDLNG LLSLNTSNEE IFNFKNTIPL
IKDSKDSFDI GISKLDEENY LEALNYFKSV HNLSDCKAQA LECEETCLDK IREPILETVD
EYISNEKYSK GIEYLDSKIN SLPDDPKLQE KRDELENLRL EHLEAYSQEN IDKATARTAP
VMEYYKKLNE DTINQFDITS NTNYLVFVNI AEQKTYVYEG SKNDWTLDKT FTCSTGIEGK
ETPVGIFTVQ TRAPWFFSPK YGQGGKYYVQ FMGNYLFHSI PFNSDKTTVS DPTLGVPASH
GCIRLSVEDS KWLYDNVQNG SKIIIY