| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0024 |
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| Symbol | addB |
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| ID | 4205501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 26188 |
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| End bp | 29664 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642564567 |
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| Product | ATP-dependent nuclease subunit B |
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| Protein accession | YP_697369 |
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| Protein GI | 110802216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
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| TIGRFAM ID | [TIGR02773] ATP-dependent nuclease subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTTAA AAATTATATA TGGAAGAGCT GGTACTGGTA AAAGTACTTT TTGTATAAAT
CAAATAAAAA AGAAAATAAA TAATTCACCT ACCAATAAAT TAATTTTACT TGTCCCAGAA
CAGTTTACTT TTCAGACTGA GAATAAAGTA TTAAATGCCA TAGGGGAAAG GTATGTTTTA
AATGCTGAGG TTCTTAGTTT TAAAAGACTT GCTCACAATG TTTTTAATGA GTGTGGAGGA
GCAACTAGAA CTATTATGGG GGATGCTGGT AAAAGCATGC TTATTTTTAA GGTACTAGAA
GATTTAGGGG ATAATATGAC TGTGTTTAAA AATGCCTCTA GACAAAAGGG CTTTATAGAC
ATAGCATCAA AAACAATAAC TGAGTTTAAA AAGTATAATG TTAATAATGA AGTTTTAGAT
TTAACTATTA ATGAAATAGA AGATGAAAAT CTAAAAATGA AGATGGAAGA ATTAAAGGAT
GTTTTTAATG AATTTAACTC AAGACTTCAT GAGGGATATG TTGATGAAGA GGATCAACTT
TTACTATTAA ATGAAAAGTT AGATGGATGT TCTTTATATG ATGGAGCTGA AATTTGGATA
GATGAGTTTA GTTCCTTTAC TCCAAATCAG TTAAGTGTTA TAGGAAAATT ATTAAAAAAA
GCTAAAAGTG TTAACATAAC TTTATCCATA GATGAGGTAA ATTCACCTAA AGTGGAAAGC
GATCTTTTTG TAGCTACAAA AAATACAGAA AAAAGGCTAA TGAATTTAAT ACAAGAAGAA
GGAATTGCTT TTAATGGATA TATTAATTTA AATGAGGATA TTCCATATAG ATTCAAAGAA
AATAAGGAAT TAGCACATAT AGAAAGGCAA CTCTATGCAT ATCCTTTTAA ACAGTATAGA
GGGGAAAATA ATAGTTTAAG GCTTTATAGA GCAAATAATA ACTATGATGA AATTGAGTTT
GTAGCTAAGG ATATATTAAG ACTTGTTAGA GAGAAGCAAT ACAGATTTAA AGATATTTCA
GTAATATGCA GAGAGGTAGA TAATTACGAG AAGGTTATAT CGGCGATTTT TGCAGAGTAT
GAGATTCCTT ATTATATAGA TAAAAAGATA GATATAGCTA GTAATCCACT TATTGTTTTT
ATAAACTCAG CAGTAGATAT AATAAGCAAA AATTGGACTT ATGAAAGTAT GTTTAAATAT
CTTAAAACTG GACTTATTAA AGAGTTTAGA GGGATTGAAG GGGCAGAGCT TATTGATGAA
CTAGAAAACT ATGTATTGGC CTATGGAATA AAGGGTAAAA AGTGGATGGA AGAATGGGTT
AACTATAGTT CTAGCATTTT AAAAGAAGAA GAGATATCAG AGGAAAATAA GCAAAGATTA
GAAAGATTAA ATGATATTAG AGAGACTATA GTAACTCCTT TAGATGAGTT TAACAAAGAG
TGCAAAGGAA AGAAAACCTT AAAGGAATTT GCCATAATTT TATATGAATT TTTAGACTCT
AAATTAAATA TTATGGATAC CATAGATAAA TATGTTGAGT ATTTCAAGGA AAATGATATG
GCAATTGAGG CAAAGGAATA TTCTGAGGTA AGAGATATTT TCATAGATGT TTTAGAGCAA
GCAGTTGATG TTCTAGGAAA TGAAGTTATG GATTTAGATG AATTTATGAA AGTATTAAAT
ATTGGATTAT CTCAATATGA AATGGGTTTA ATTCCTGTAG CCTTAGATCA AGTAAACATA
GGGGATATAA CAAGAATAAA AAGTAGAGGA ACAAAGGCTT TATACATTAT AGGAGTAAAT
GATGGGGTGC TCCCTTCAGC TAGCAAAGAA GAAGGAATAT TATCAGATAA TGATAGAGAA
ATTTTACTTG AAAAAGGGAT TTCACTAGCT TCAGATACTA GAACAAAAAT CTTTGAAGAG
CAATTTTTAG TTTATACAGC CTTTACCATA GCAGAGGAAT ACTTAGTTGT TACTTATCCT
TTAGCAGATT TTGAAGGTAA ATCTCAAAGA CCTTCTATTA TAGTTCATAG ACTTAAAAAG
ATACTTCCAA ATGTAAAGGA AGAAAGTGAA GGCTTTAAAT TAGTAAATGA TAAGTATGAT
AAGATTTCTG CTAAAATTCC TACTTTAAAT GAGCTTATGA TAGCAATTAG AAAAAATTAT
GATGGTGCTG AGATAGATGA CTATTGGAAA TATGTTTATG ATTGGTATTT AAGAGAACCT
AAGTGGAAAG AAAGAATAGA GTATGTAAGG AAGGGGCTTG AATACACTAA TTTAGAAAAT
AATATTTCCA AGGAAAAGGC TAAAAAGCTT TATGAAGATA ATAAAAATAA AATTTCACTA
AGCGTTTCAA GATTAGAGAG GTATGCCCAG TGTCCATTTG CTTACTATAT ACAATATGGA
TTAAAGGCTA AGGATAGAAA AATATATGAG TTTACAGCAC CTGATTTAGG TAGCTTTATG
CATGAAATAT TAGATGAGTT TACCAATGAA ATTAAGGAAA AAGATTTAAA ATGGAGTGAT
TTAAGCAAGG AGAATTGCAA AAACATAATA AATTCTTTAG TTGATAATCA GGTTAAAAAT
AATAAGTCAT CCATATTAAA TAGTTCAAAG AGATATTCTT ATTTTACAGA TAGATTTAAG
AGAATTCTTA CAAAATCAGT TATGGTAATT AGTGAACAGA TGAAGAGAAG TGATTTTGAA
ATTTATAAAA ATGAATTGGC CTTTGGATTT TCTAAAGATG TGAATTCAAT AAAACTAGAC
CTTCCTTCAG GAGAAAGTTT TTATTTAAAT GGAAGAATAG ATAGAATTGA TAAATTAAAT
TTAGATGGTG AAACCTATTT AAGAATTATA GATTATAAAA CTGGCTCTAA AAAGTTTGAT
TTAAATAAAT TTTATAATGG ACTTCAAATG CAACTTTTAG TTTATTTAGA TGCCCTTATA
AATAATTCAG AAAATATAGT TGAAAATCAA GCTATGCCAG GGGCAATACT TTATTTTAGA
ATAGATGACC CTATATTAAA GTCTAAGGGA GATTTAACAG AAGAAGAAAT AAAAAGTGAG
ATTTTAAAAG AGTTAAAATT AGAAGGTCTT TTACTAGACG ACGTAAAAGT TGTCAAGGCA
ATGGATAATA CTTTAGAACC TGGAACACAC TCCCTTATAA TACCTGCAAA CATGAAAAAG
GCAGGGGATT TAGGGAAAAA TAAAGCTTTA ATAACCATGG AGCAGTTTGA ATTATTAAGA
AAGTATGTAA ATGAAAAAAT GGTTGAGATA TGCCAAAATA TGATAGAAGG TAAAATTGAT
ATAGAACCAT GTAAAGAAAA TAAAAATATA GTGTGTGATT ATTGTAATTA CTCACATATA
TGCCAGTTTG ATTCTAGTTT AGAAGACAAT AGATACAAAG TTATTCCAAA GAAAAAAGAT
GAAGACATAT GGAAGAGTAT AAATGAAAAA GTAGGTGGTG AAGTAAATGG GGACTAA
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| Protein sequence | MGLKIIYGRA GTGKSTFCIN QIKKKINNSP TNKLILLVPE QFTFQTENKV LNAIGERYVL
NAEVLSFKRL AHNVFNECGG ATRTIMGDAG KSMLIFKVLE DLGDNMTVFK NASRQKGFID
IASKTITEFK KYNVNNEVLD LTINEIEDEN LKMKMEELKD VFNEFNSRLH EGYVDEEDQL
LLLNEKLDGC SLYDGAEIWI DEFSSFTPNQ LSVIGKLLKK AKSVNITLSI DEVNSPKVES
DLFVATKNTE KRLMNLIQEE GIAFNGYINL NEDIPYRFKE NKELAHIERQ LYAYPFKQYR
GENNSLRLYR ANNNYDEIEF VAKDILRLVR EKQYRFKDIS VICREVDNYE KVISAIFAEY
EIPYYIDKKI DIASNPLIVF INSAVDIISK NWTYESMFKY LKTGLIKEFR GIEGAELIDE
LENYVLAYGI KGKKWMEEWV NYSSSILKEE EISEENKQRL ERLNDIRETI VTPLDEFNKE
CKGKKTLKEF AIILYEFLDS KLNIMDTIDK YVEYFKENDM AIEAKEYSEV RDIFIDVLEQ
AVDVLGNEVM DLDEFMKVLN IGLSQYEMGL IPVALDQVNI GDITRIKSRG TKALYIIGVN
DGVLPSASKE EGILSDNDRE ILLEKGISLA SDTRTKIFEE QFLVYTAFTI AEEYLVVTYP
LADFEGKSQR PSIIVHRLKK ILPNVKEESE GFKLVNDKYD KISAKIPTLN ELMIAIRKNY
DGAEIDDYWK YVYDWYLREP KWKERIEYVR KGLEYTNLEN NISKEKAKKL YEDNKNKISL
SVSRLERYAQ CPFAYYIQYG LKAKDRKIYE FTAPDLGSFM HEILDEFTNE IKEKDLKWSD
LSKENCKNII NSLVDNQVKN NKSSILNSSK RYSYFTDRFK RILTKSVMVI SEQMKRSDFE
IYKNELAFGF SKDVNSIKLD LPSGESFYLN GRIDRIDKLN LDGETYLRII DYKTGSKKFD
LNKFYNGLQM QLLVYLDALI NNSENIVENQ AMPGAILYFR IDDPILKSKG DLTEEEIKSE
ILKELKLEGL LLDDVKVVKA MDNTLEPGTH SLIIPANMKK AGDLGKNKAL ITMEQFELLR
KYVNEKMVEI CQNMIEGKID IEPCKENKNI VCDYCNYSHI CQFDSSLEDN RYKVIPKKKD
EDIWKSINEK VGGEVNGD
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