Gene CPR_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0022 
Symbol 
ID4206204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp24844 
End bp25725 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content27% 
IMG OID642564565 
Producthypothetical protein 
Protein accessionYP_697367 
Protein GI110803720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG AAAAACTAAA TGATATTAAA AATAATTCTA AGGAAATTAT TTTTAATAGT 
AATTCTAAAA TAGTCTTATT TAGTGATTGT CATAGAGGAG ATGGCACATA TAAAGATAGT
TTAGCTCCTA ATATCAACAT TTACCTGTCG GCTATAAGGT ATTATTATAA AAATAAATTT
ACTTATATAG AGGTTGGAGA TGGCGATGAA TTATGGAAGT TTAAAAATAT ACAAGAGATA
TATGATATGA ATTATGAGAT TTATGAAGTA TTAGAAAAAT TTAAAGAAAA AAAAAGACTT
TATATGATAT ATGGAAATCA TGATAAAGAT AAGAGTAAGA TAAAATTTTT AAGGAAAAAC
AAGAGGAGAA ATAGGTTTAA TCACTCTGCT TCAGATTTTT ATAGTACTTT AAATATATAT
GAATCTTTAG TACTAGTGCA TGAAGAAAGT AAAAAAGATT TTTTTGTAAT TCATGGTCAT
CAAATAGACT TTTTAAATAA TGAATTAGCA TTTTTATCAA AATTTTTAGT GAGATATGTC
TGGGCTATTT TAGAGGCTTT TATGGGATTC AAAGATCCTA CAAGTCCTGC AAAGAGTAAT
AATAAAAGAA ATTTATTTGA TGAGAAAATA AGTAAGTGGG CAGAGGAAAA TAAAACTAGA
GTTATTTTAG GACATACTCA TAAAACGCTA TTTCCTAAGA GCAGGAATGA ATCAACATAC
TTTAATATAG GGTGCTGTGT ATTACCTAGA ACTATTACAG CTATAGAAAT TGAGAGGGGC
GAGATTTCAC TTATAAAATG GACAATAAAG GCTGATGAAA AGGGATCACT TTTTGTTGGA
AGAGATATTA TAGGTGGGCC TATTAGAATA GAAAATTATT AA
 
Protein sequence
MKVEKLNDIK NNSKEIIFNS NSKIVLFSDC HRGDGTYKDS LAPNINIYLS AIRYYYKNKF 
TYIEVGDGDE LWKFKNIQEI YDMNYEIYEV LEKFKEKKRL YMIYGNHDKD KSKIKFLRKN
KRRNRFNHSA SDFYSTLNIY ESLVLVHEES KKDFFVIHGH QIDFLNNELA FLSKFLVRYV
WAILEAFMGF KDPTSPAKSN NKRNLFDEKI SKWAEENKTR VILGHTHKTL FPKSRNESTY
FNIGCCVLPR TITAIEIERG EISLIKWTIK ADEKGSLFVG RDIIGGPIRI ENY