Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2976 |
Symbol | rpsR |
ID | 4203115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3240554 |
End bp | 3240796 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083843 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_697330 |
Protein GI | 110801194 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000357277 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG TAAAAAGAGG CGGAAAATTC AGAAGAGCAA GAAAAAAAGT TTGCATATTC TGCGTTGATA AAGCTGAATC AATAGATTAC AAAGATGTAG CTAAATTAAA GAAATACATC ACAGAAAGAG GTAAAATATT ACCAAGAAGA ATTTCTGGAA CTTGTGCTAA GCATCAAAGA CAATTAACAG ATGCTATCAA GAGATCAAGA AATATCGCAT TATTACCATT CACAACTGAG TAA
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Protein sequence | MSNVKRGGKF RRARKKVCIF CVDKAESIDY KDVAKLKKYI TERGKILPRR ISGTCAKHQR QLTDAIKRSR NIALLPFTTE
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