Gene CPF_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2970 
SymboldnaB 
ID4203173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3232838 
End bp3234172 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content35% 
IMG OID638083837 
Productreplicative DNA helicase 
Protein accessionYP_697324 
Protein GI110799742 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAC CAGTAATGAA GAGTTTGCCA CAAAGTATAG AAGCGGAACA ATCTGTTTTA 
GGGGCAATGA TAATAGATAG AACAACCATA GCTCAAGCCG CTGAGGTTTT AAACAAGGAT
TCATTTTATA GAGATGCTCA TAAGGTAATA TTTCAAAGTA TAATAGAAAT GTACCAAAGA
GATCAAGCTG TAGACCAATT AACTCTTTTA GAGTATTTAA AATCTACTGA TAGACTTGAA
AAAGCCGGTG GTATAAGTTA TGTAACAGAG ATAAGTGCAT CTGTACTTAG TACAGTTAAC
ATAAAATCAT ACATAAAAAT AGTTGATGAA AAAGCTATGC TTAGAAGACT TATAAAATCT
TCTACAGAAA TTATAGAGAA TTGTTATAAC AATCAAGAAG ATGTTGAAAA AGTTATAGAT
TCAGCAGAGA AGAAAATATT TGATTTATCT GAAAAGAGAT CATCAAATGA TTTTGAACCT
TTAAGTGTTG TTCTTGAAAG AGGTTTTGAG CAAATAGAGG CTATATTTAA TAATGAAGGA
GAACTTACAG GTGTTGGTTC TGGATTTAAA GACTTGGATG AGATGACCTC TGGATTCCAA
AAGGGTGATA TGGTGCTTAT AGCAGCAAGA CCATCTATGG GTAAAACAAC CTTTGCTCTT
AACATAGCAG AACATGCTGC CTTAAGAGAG GGAAAGAGTG TTGTTATATT CTCTTTGGAA
ATGTCAAAGG AACAGCTTGC ATATAAGTTA TTATGTTCAG AGGCTAATGT AGATATGTTA
AGTCTTAGAA CAGGTAAATT AACTCCTGAG GATTGGGACA ATATAGCTAG AGCATCAGGC
CCACTAGCAT CAGCTAAGAT ATACATAGAT GATACTGCTG GGGTTTCTGT AATGGAAATG
AGATCTAAGT GTAGAAGATT AAAAATGGAA TATGGAATAG ATCTTATACT TATAGACTAC
TTACAACTTA TGAGTGGAAG TGGTGAAAGT AGACAACAAG AAGTTGCGGA GATTTCAAGA
AATATAAAAG CTATAGCTAA GGAAATGGAA TGTCCAGTTA TAGCCTTATC TCAGCTTTCT
CGTGCTCCAG AGCAAAGAGC AGACCATAGA CCTATGTTAT CTGACCTTAG AGAATCTGGA
TCAATAGAGC AGGATGCTGA CCTTGTTATG TTCTTATATA GAGATGAGTA CTATAACAAG
GAAACAGAAG ATAAAAATGT TGGAGAATGT ATAATAGCTA AGCAGAGAAA CGGTCCAGTT
GGAACAGTTA AGCTTGCATG GCTTGGTCAA TACAGTAAAT TTGCAGATTA TGAAGCTATT
CATAAGGATG TTTAA
 
Protein sequence
MEAPVMKSLP QSIEAEQSVL GAMIIDRTTI AQAAEVLNKD SFYRDAHKVI FQSIIEMYQR 
DQAVDQLTLL EYLKSTDRLE KAGGISYVTE ISASVLSTVN IKSYIKIVDE KAMLRRLIKS
STEIIENCYN NQEDVEKVID SAEKKIFDLS EKRSSNDFEP LSVVLERGFE QIEAIFNNEG
ELTGVGSGFK DLDEMTSGFQ KGDMVLIAAR PSMGKTTFAL NIAEHAALRE GKSVVIFSLE
MSKEQLAYKL LCSEANVDML SLRTGKLTPE DWDNIARASG PLASAKIYID DTAGVSVMEM
RSKCRRLKME YGIDLILIDY LQLMSGSGES RQQEVAEISR NIKAIAKEME CPVIALSQLS
RAPEQRADHR PMLSDLRESG SIEQDADLVM FLYRDEYYNK ETEDKNVGEC IIAKQRNGPV
GTVKLAWLGQ YSKFADYEAI HKDV