Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2959 |
Symbol | sdhB |
ID | 4201700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 3223827 |
End bp | 3224507 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638083826 |
Product | L-serine dehydratase, iron-sulfur-dependent, beta subunit |
Protein accession | YP_697313 |
Protein GI | 110800656 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAT ATGGTGTTTT CGATATCCTT GGACCAATTA TGATTGGACC ATCTAGCTCT CATACTGCAG GGGCTGCTAG ACTTGGAAAA GTAGCTAGAG CAATCTGTGG TAAACCAATG AAAAAAGTTA CTTTTCTTTT ACACGGTTCT TTTGGCAAAA CTTATAAAGG TCATGGTACA GATAAAGCTT TAGTAGCAGG TATCCTTGGA ATGGAACCTT CTGATACACA CCTTAGAAAT TCTTTAGAAA TAGCAAAAGA AAAAAATATT GAAATAGAGT TTAAAGAAGT TGATTTAGGA GATGCACATC CTAATACAGT TAAATTTATA ATTGAAGATA TTGATGGTGT TTTTCATGAA ATAGTAGGAT CATCAATAGG TGGTGGAAGT ATTAAAATCA CTGAGGTAAA TGGTAGCGTT GTTGAATTTA CTGGTGAATA CCCAACACTA ATAATCTCAC ATAAAGATGT TCCTGGAGCT GTATCTAAAG TAACAGCCAT AGTTTATGAG CATAATATTA ATATAGCTTT CATGAAAGTC TTTAGAACAG AAAGAGGAAA GGCTGCAAGA ATGGTCTTTG AAATGGATAG CCCTATTACA AAGGACATTA TTGATGAAAT TAAGAAAGTT GAAGCTGTTG AAAAACTAGT TGTTATAAAC CCAGTAAAGG AGGATATTTA G
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Protein sequence | MNTYGVFDIL GPIMIGPSSS HTAGAARLGK VARAICGKPM KKVTFLLHGS FGKTYKGHGT DKALVAGILG MEPSDTHLRN SLEIAKEKNI EIEFKEVDLG DAHPNTVKFI IEDIDGVFHE IVGSSIGGGS IKITEVNGSV VEFTGEYPTL IISHKDVPGA VSKVTAIVYE HNINIAFMKV FRTERGKAAR MVFEMDSPIT KDIIDEIKKV EAVEKLVVIN PVKEDI
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