| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2859 |
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| Symbol | |
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| ID | 4202836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3126093 |
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| End bp | 3127460 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083726 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_697223 |
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| Protein GI | 110799155 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGATC AAAAATTATT AGGGGAAGAA TCAGAATTAA AGCTTTTGAT CAAGTATTCG
GTGCCAGCTA TTATAGGTAT GCTTGTAAAT GCACTTTATA ATATTGTTGA TAGAATATTT
ATTGGACACA TTCCAGGAGT TGGGCCAATG GCCATTACTG GAGTTGGTAT AACTATGCCA
ATTATGTCTA TATTACTTGG TTTTGGAATG CTTATAGGGA TTGGTGCTAC TGCAAACATC
TCTATAAAAT TTGGACAAAA TAAAAGAAAA GATGCAGAGA AAATATTAGG AAACTCTGTG
GTCTTAATAA CTATAATATC TTTAGTTTTA ACTATTGTTG GAATTGTCTT TGCAAACAGT
ATTCTACACT TATTTGGAGC AAGTGAGGCT ACAATTTTTT ATGCAAAGGA ATATATAAAT
GTAATACTTT TAGGAACTAT ATTTAATTTA ATGTCATTCT CTTTATATAG TACAATTAGA
GCAGATGGAA ATCCAAAGAT GTCAGCTGCA GTAATGGTAC TTGGATGTAT TATAAATGTA
ATATTAGATG CAGTATTTAT ATTTGTATTT AACTTAGGGA TAAAAGGTGC AGCTTTAGCT
ACAGTAATTT CTCAAATAGT TACTACATTA ATAATGCTTT ATTATTATAC ATTAGGAGGA
TCAAACTTAA AATTAAAATT TGAAACTCTT AAATTAGATT GGAGATTAGT TAAGATAGTT
TTAGCTATAG GTGTAGCTCC ATTTTCAATG CAGATGGCTG CAAGTGTAGT TCAAGTAATA
GCTAACAATG CACTAAGAAT GTATGGAGGA GACTTAGCTA TAGGAGCTAT GGCGGCAATT
TCTTCAATAG CAATGATATT TTTAATGCCT ATATTTGGTA TAAACCAAGG TTCACAGCCT
ATAATTGGAT ATAACTATGG AGCTAAGAAG TATGAAAGAG CTCAAAAAAC AGTTAAGTTA
GCTATGATAG CAGCGACAAC AATACTTGTT TTAGGAGGAA TATTAATTCA AGCATTCCCA
GCCTTAGTAA TAAGTATGTT TAATTCAGAT CCTAAACTTT TAGAAATAGG AGTTCCAGGA
TTAAGAATAT ATTTATTTAT GATGCCTATA ATAGGTATAT CAATAATAGG ATCTAACTAT
TTCCAATCAA TAGGTAAAGC TAAGTTAGCA ACTTTTTTAA GTTTATTAAG ACAGGTTATA
CTTTTAATTC CTTTAACATT AGTCTTACCT AAGATTGCAG GATTAGGTTT AACAGGAGTT
TGGTTAGCGG GTACAGTTTC AGACTTCTTA TCTACAATAA TAACTGGATT ATTCATAATT
AAAGAGTTTA AAAAAGAAGA TAGTATAGAA GATGAAAAAG CGATTTAA
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| Protein sequence | MKDQKLLGEE SELKLLIKYS VPAIIGMLVN ALYNIVDRIF IGHIPGVGPM AITGVGITMP
IMSILLGFGM LIGIGATANI SIKFGQNKRK DAEKILGNSV VLITIISLVL TIVGIVFANS
ILHLFGASEA TIFYAKEYIN VILLGTIFNL MSFSLYSTIR ADGNPKMSAA VMVLGCIINV
ILDAVFIFVF NLGIKGAALA TVISQIVTTL IMLYYYTLGG SNLKLKFETL KLDWRLVKIV
LAIGVAPFSM QMAASVVQVI ANNALRMYGG DLAIGAMAAI SSIAMIFLMP IFGINQGSQP
IIGYNYGAKK YERAQKTVKL AMIAATTILV LGGILIQAFP ALVISMFNSD PKLLEIGVPG
LRIYLFMMPI IGISIIGSNY FQSIGKAKLA TFLSLLRQVI LLIPLTLVLP KIAGLGLTGV
WLAGTVSDFL STIITGLFII KEFKKEDSIE DEKAI
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