Gene CPF_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2852 
Symbol 
ID4201611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3118034 
End bp3119647 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content29% 
IMG OID638083719 
Producthypothetical protein 
Protein accessionYP_697216 
Protein GI110800759 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGG GACAGAGTGC AAAAAGGTTG AAAGAAATAA TTAGGGTATT TACTTATTAT 
GGTTTTGACT TTTTAATTTC ATCAAAGTTG CCTAATAGTA AAAAGGCTGA GCCAAGGCCT
CAAGCACTTA GAGAGGCTTT AGAAGAATTA GGGGCAACCT TTGTTAAAAT TGGACAAATA
TTGAGTACAA GACCAGATTT ACTTCCTAAA GCTTATATTG AAGAGTTGGA AAAGTTACAG
GATAATAATG AAATAACAGA CTTTCATAAG GTAAAGGAAA TATTTTATGA ATCTTTTGGG
ACAGATATAA ATACATATTT CTTAGAGTTT AGTGAAACTC CATTAGCGTC AGCATCAATT
GCACAGGTTC ATAGAGCTAA ATTAATAGAT GGAAGGGATG TAGTAGTTAA GGTTCAGCAT
TATAAAATAG ATGAAAAAAT GAAGCTTGAT TTAAGCATAT TAAGAAGACT TAGCAAATTA
ACATCTAATC ATATAACGAA TACCTTAGTT AATCCAGTTG AAGCTTTTAA GGAAATTGAA
GATGCTACCT TAAAGGAACT TGATTTCGAA AAGGAAGCAA AGAATACTAA AAGGTTTAGA
GAGCTTAATA AAAATGTAGC CTGTGTTGGT GCACCTATAA TTATTGATAA GCTTACTTCT
AAGAAAATCC TTACCATGGA ATATATAGAT GGTTATAAAG TAACAGATTT TAATATTTTA
AAAGAAGAAG GATATGATTT TGAAGATATT GCAAACAAAT TAGCAAACTC ATTTTTTAAA
CAGGTATTAG AAGATGGATT TTTTCATGGT GATCCCCATC CAGGAAATTT ATTTATAAGA
GAAGGCAAAA TATACTTTAT AGATTTTGGC TTAGTTGGAA CTTTAGAAGC CAATTTAAGA
AATTGGCTTA ATAAGGCCAT GATTGCTATG GTTTTAGGGG ATATTGATAC CTTAGTTGAT
TTTGTAAATG CCATAGGCAT AAAAAAAGGA AAAGTTGAAT ATTCAATATT ATATGATGAT
TTAAAAAATA TAGTCTCAAA ATATATAAAT GCATCTTTAA AGACAATAAA GATATCAGAT
TTATTTAAAG AAATCTTTGA GATTGCAGAA CGAAATAATA TTCAATTTCC AAGAGAATTA
GTTGCTTTAG TAAGATCCAT AGTTATATTA GAAGGGGTTA TAGCTAAAAT AGATCCAGAT
TTAGAAATTA TGGAATGTAT TTATCCTTAT GTAAAGGAAA GAAATAAAGA GGAAATGTTA
AAAAGTTTAA ACAAGGATAA ACTTATAACT GAAGCCTATA AGTTTGCCTC TAAGAGCATA
GAAATTCCTA CTAAATTTTC AGAGCTTGTG GATAGCTTAA CTAAGGGAAG AGCTAAGTTG
CAATTTGAAA TGAAGGGCTT AGATAAGCCA CTTACAGATT TAAATAGAAT GGTAAATAGA
GTAGCATTCT CTTTAATAGT TGGATGTATG ATTATAGGTT CTTCATTAAT AGTTAATGCT
AAAACTGGAC CTACTTTTCA AGGGGTTCCT ATTTTAGGAT TAATAGGGTT TATAGTATCA
GGAATTTTTG GTTTGTGGTT ATTGATTTCC ATAATAAAAT CAGGCTTTTT TTAA
 
Protein sequence
MSKGQSAKRL KEIIRVFTYY GFDFLISSKL PNSKKAEPRP QALREALEEL GATFVKIGQI 
LSTRPDLLPK AYIEELEKLQ DNNEITDFHK VKEIFYESFG TDINTYFLEF SETPLASASI
AQVHRAKLID GRDVVVKVQH YKIDEKMKLD LSILRRLSKL TSNHITNTLV NPVEAFKEIE
DATLKELDFE KEAKNTKRFR ELNKNVACVG APIIIDKLTS KKILTMEYID GYKVTDFNIL
KEEGYDFEDI ANKLANSFFK QVLEDGFFHG DPHPGNLFIR EGKIYFIDFG LVGTLEANLR
NWLNKAMIAM VLGDIDTLVD FVNAIGIKKG KVEYSILYDD LKNIVSKYIN ASLKTIKISD
LFKEIFEIAE RNNIQFPREL VALVRSIVIL EGVIAKIDPD LEIMECIYPY VKERNKEEML
KSLNKDKLIT EAYKFASKSI EIPTKFSELV DSLTKGRAKL QFEMKGLDKP LTDLNRMVNR
VAFSLIVGCM IIGSSLIVNA KTGPTFQGVP ILGLIGFIVS GIFGLWLLIS IIKSGFF