Gene CPF_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2848 
Symbol 
ID4202899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp3114638 
End bp3115219 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content28% 
IMG OID638083715 
Producthypothetical protein 
Protein accessionYP_697212 
Protein GI110800547 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTT TAGCCCTACC TAAAATAGGT GCAAGAAACT TAAAGACAGC TTTGGCTGTA 
ACTTTATGCA TAGGATTTTT TGAGCTAATA CACAGACAAT ATCCTTTTTA TGCTTGTATA 
GCCGCTGTAA TCTGTATGAA AGATACTGTT GAAAACTCAT ATAAAATGGG AAAAAGCAGA 
ATGATTGGTA CAATAACTGG TGGACTTGTT GGCTTAGCTT TAACTTTTAT AGCTTTAAAC 
TTTAACCTTA CAAGATTCTC AGGAATAATA ACAGGGATTG GAATAGTTAT AACCATTTAT 
CTACTTAATG TTTTTAACAG AAAAGGGTCT GTTTCTATAG CATGTATAGT ATTAATAGCA 
ATTATGACAA ACTTACATGG TAAAGCTCCA TATGCCTATG CAATTGATAG AATTATAGAT 
ACTTTTATAG GTATAATAAT TGCTCTATTA ATAAATAACT ACATATATAA ATATGAAAAT 
AAGGTAAAAA AAGATTTAGA AAATATAGAA GAAAAAATCT CTAGACTTGA AAAAGAAGTT 
AAAGATGATA TAAAAAATCT AGAAGAAAAT AAAAAGAACT AA
 
Protein sequence
MKGLALPKIG ARNLKTALAV TLCIGFFELI HRQYPFYACI AAVICMKDTV ENSYKMGKSR 
MIGTITGGLV GLALTFIALN FNLTRFSGII TGIGIVITIY LLNVFNRKGS VSIACIVLIA 
IMTNLHGKAP YAYAIDRIID TFIGIIIALL INNYIYKYEN KVKKDLENIE EKISRLEKEV 
KDDIKNLEEN KKN