Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2847 |
Symbol | metG |
ID | 4201026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3112212 |
End bp | 3114149 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083714 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_697211 |
Protein GI | 110801166 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTAAAA AACCATATTA TATTACAACG CCTATTTATT ACCCATCAAC AAATCTACAC ATAGGTAATA CTTATACAAC TGTGGCTGCT GATGCTATAG CAAGATTCAA AAGACTTACA GGTCACGAAG TAATGTTCTT AACAGGAACA GATGAGCATG GTCAAAAAAT AGAAAGAATA GCTAATGAAA AGGGAATTAC TCCAAAGGAG CATGTTGACG AAATAGTTGC AGGAATTAAA GATCTTTGGA AAATGATGAA TATAAGCTAT GACAAATTTA TAAGAACAAC TGATGATTAT CATGTGAAAG CTGTTCAAGA GATTTTCAAA AAGTTATATG ATCAAGGAGA TATATATAAA GATTCTTATG AAGGGCTTTA CTGTACTCCA TGTGAATCAT TCTGGACAGA AACTCAATTA GTAAATGGAA ACTGCCCTGA TTGTGGAAGA CCAGTTGAAA AAGCTAAGGA AGAAGCTTAC TTCTTTAAAA TGAGCAAATA TGCTGATAGA TTAATTCAGT ATATAGAAGA ACATCCAGAT TTCATTCAAC CAGAATCAAG AAAGAATGAA ATGTTAAATA ACTTCTTAAG ACCAGGATTA CAAGATCTTT GTGTTTCAAG AACAAGCTTT ACTTGGGGAA TACCTGTAAG CTTTGATGAA AAGCATGTTA TCTATGTTTG GATAGATGCA TTATCAAACT ACATAACTGC TTTAGGATAT GGTCAAGAAG ACCAAGAGTT ATACAAAAAG TTCTGGCCTG CTGATGTTCA CTTAATAGGA AAAGATATTT TAAGATTCCA CACAATTTAC TGGCCAATAA TGTTAATGGC TTTAGGATTA GAATTACCTA AGCAAGTATT TGGTCATGGA TGGTTACTTG TTGATGGAGG AAAAATGTCA AAATCAAAAG GTAACGTTGT TGATCCAGTA GTTTTAGTTA ACATGTTTGG AGCTGACGCT GTAAGATACT ACTTATTAAG AGAAATACCA TTTGGTTCAG ACGGATTATT CAACAATGAA ATATTTATAA AGAAAGTAAA TACAGACTTA GCTAATGACT TAGGTAACTT ATTATCAAGA ACAATAGCTA TGGTTTATAA ATACTTTGAT GGAGTTATTC AAGCACCAAC ATGCAAGGAA GCTATTGATG ATGAATTAAT AAACTTAGCT TTATCTACTC CAGGAAAAGT TGAAGCTAGC ATAGATGCAT TAAAGATTCC AGAAGCTTTA GAAAGTATAT GGACTTTAAT AAGCAGAGCT AACAAATATA TAGATGAAAC AACTCCTTGG ATACTTGCTA AGGATGAAGA AAAGAAAGAA AGACTAGGAA CAGTTTTATA TAACTTATTA GAAACTTTAA GATTTGTTTC AGTAATGATT TCACCATTCT TAACAGAAAC AAGTGTAAAA ATAGATGCTC AATTAAACAC TAAAGTTACT ACTTGGGAAA GTTTAAAGGA GTTTAATGGA ACAGTTGCAG GAGATAAAGT AGTTAAGGGT GATGTTATAT TCCCAAGAAT AGATGTTGAG GAAAAATTAG CAGAACTTGA AGCTTTAAAA CAAGCTCCAG TTAAGCCAGC TAACGAAGAG TTAGTTAAAA ATCCAATAAA AGAAGAAATA ACTATAGATG ACTTTGACAA GATAGATTTA AGAGTAGTTA AAGTATTAGA GTGTGAACCA GTTAAAAAAG CTAAAAAGTT ATTAAAACTT AAAGTTGATT TAGGTGGAGA AGAAAGACAG GTTATTTCAG GAATAGCACA ATACTATAAA CCAGAAGAGT TAGTTGGAAA GTATGTAGTA TTAGTTGCTA ACTTAAAACC AGTTAAATTA AGAGGAGAAT TATCTCAAGG TATGATACTT GCAGCAGCAC CTTCAGATGA TTCAGAACTT CTATTAGTTA ACCCAGGAGA AATGTTAACT GGAAGCCAAG TAAGATAG
|
Protein sequence | MCKKPYYITT PIYYPSTNLH IGNTYTTVAA DAIARFKRLT GHEVMFLTGT DEHGQKIERI ANEKGITPKE HVDEIVAGIK DLWKMMNISY DKFIRTTDDY HVKAVQEIFK KLYDQGDIYK DSYEGLYCTP CESFWTETQL VNGNCPDCGR PVEKAKEEAY FFKMSKYADR LIQYIEEHPD FIQPESRKNE MLNNFLRPGL QDLCVSRTSF TWGIPVSFDE KHVIYVWIDA LSNYITALGY GQEDQELYKK FWPADVHLIG KDILRFHTIY WPIMLMALGL ELPKQVFGHG WLLVDGGKMS KSKGNVVDPV VLVNMFGADA VRYYLLREIP FGSDGLFNNE IFIKKVNTDL ANDLGNLLSR TIAMVYKYFD GVIQAPTCKE AIDDELINLA LSTPGKVEAS IDALKIPEAL ESIWTLISRA NKYIDETTPW ILAKDEEKKE RLGTVLYNLL ETLRFVSVMI SPFLTETSVK IDAQLNTKVT TWESLKEFNG TVAGDKVVKG DVIFPRIDVE EKLAELEALK QAPVKPANEE LVKNPIKEEI TIDDFDKIDL RVVKVLECEP VKKAKKLLKL KVDLGGEERQ VISGIAQYYK PEELVGKYVV LVANLKPVKL RGELSQGMIL AAAPSDDSEL LLVNPGEMLT GSQVR
|
| |