Gene CPF_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2841 
Symbol 
ID4201628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3105278 
End bp3105826 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content33% 
IMG OID638083708 
Productprimase-like protein 
Protein accessionYP_697205 
Protein GI110801127 
COG category[L] Replication, recombination and repair 
COG ID[COG1658] Small primase-like proteins (Toprim domain) 
TIGRFAM ID[TIGR00334] ribonuclease M5 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAAAG AAGTTATAGT AGTTGAAGGT AGAGACGATA TAACAGCAGT TAAGAAAGCC 
ATAGATGCTG AAATCATAGC TGTTGGTGGA TTCGGAATAA ATGCAAAGGT TATAGAGAGA
ATAAAAGAAG CTCAAAAAAG AAAGGGAGTT ATTGTATTTA CTGATCCAGA CTTTGCTGGA
GAAAAGATAA GAGCAATAAT ATCAAAGAGA GTTAAAGGCG TTAAGCATGC TTACATAGGA
AGAGCAGAGG GAACTAGAGC TAAGGATGGA AACATAGGTG TAGAGAATGC GTCACCAGAG
GCTATAATTA GGGCCTTAGA AAATGCAAAA ATAACTTTAG AAGAAAAAAG AGAAGAATTT
ACAATACAAG ATTTAATATA CTTTGGATTA TCAGCAGATC CAAAGGCTAA AGTGAGAAGA
GAGTTACTTG GTAAAGAATT AAGAATCGGT TATGGAAATG CAAACCAAGT TCTTTCAAGA
TTAAATAACT ATGGCATAAC AAAAGAAGAA TTTGTTAAAG CTATAGAAAA GGTAGAAAAG
ATGATATAG
 
Protein sequence
MIKEVIVVEG RDDITAVKKA IDAEIIAVGG FGINAKVIER IKEAQKRKGV IVFTDPDFAG 
EKIRAIISKR VKGVKHAYIG RAEGTRAKDG NIGVENASPE AIIRALENAK ITLEEKREEF
TIQDLIYFGL SADPKAKVRR ELLGKELRIG YGNANQVLSR LNNYGITKEE FVKAIEKVEK
MI