| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2828 |
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| Symbol | |
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| ID | 4200969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3090850 |
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| End bp | 3092241 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083695 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_697192 |
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| Protein GI | 110799138 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT TTAAGAACAA GGAATTTTTA CCTACTATGA TAATGATGGC TGTTCCTATA
ACAATTCAGA GTTTCATTAC ATCGTCATTA AATCTAGTAG ATAATTTAAT GGTAGGAAAG
CTAGGAGAAG AGTCAATAGC CTCAGTTGGG TTAGCTAACC AATATATATT TATTTTTACC
TTATGTATTC TTGGGATAAA TGCTGGAGCT AGTGTTTTCA TGTCTCAGTT TTGGGGTAAA
AAAGATTTGA AAAATATTAA AAAAGTTTTG GGACTAGATA TATCTATTGG ACTTATAGTT
TCAACTCTTT TTGCCTTAGG CTCTGGATTT TTTTCTTATG AAATTATGGA GATTCTTTCT
AATGATTTAA ATGTTATAGA ATTAGGAGCT AAATATCTAC AGATTGTTTC TGTAAGTTGT
ATATTTACTA ATTTTACTCA AGCTTATTCT TCAGCTTTAA GAAGTACAGA GCAACCTAGT
GTTCCTATGT ATGCAAGTAT AGTTGGAGTC TTGATAAATG CATTTTTAAA CTGGGTATTT
ATATTTGGAA ATTTAGGATT TGAGCCTATG GGAGTTAATG GTGCAGCTTT AGCAACCACT
ATTGCAAGAT TAGTAGAGAT GATATTTATA GTTTCCTTTG TTTATTTTAG AAAGAATAAG
GTGGCATCAA GATTAAATGA GCTTATATCC TTTGATTTAA ATTTTGTAAA AATATACTTT
AGAACATCTT GGTCAGTTAT AGTAAATGAA ATAGTATGGT CTTTAGGTAT GACTGCATAT
TCAATAGCCT ATGCTAGAAT AGGAACAAAC GCTGTTGCTA GCATGCAGAT TGCTACCACA
TTAAATAATA TGTTTATGGT ATTACTAATA GGTTTAGCTA CAGCTTCTTC TATAATGATA
GGGAATAAAA TTGGCTCTAA TGAGGAAGAA ATAGCAAGAG AATACGCTAA GGATATAGCT
GTAATAGCTG TTTTAGTAGG ATTTATTTTA GGAATTTTAA TATGGATAAC AGCACCATTA
GCATTAAAGC CTTTTAATGT AAGTGAAGGA ACTTATTTAG ATACAGTTAA AGTTTTAAGA
ATAATAGGAT TGTTCTTTAC AATAAGAGCT TTTAATATGG TTATGATTGT TGGTGTATTT
AGAGGTGGTG GAGATACTAC TTACTCTATG TTAGTACAAT GTGGAACAAT ATGGCTTTAT
GCTGTACCAA TGGCTTTCCT TGGAGCTACA GTATTTTCTT TACCTGTATA TGGAGTATAT
TTCTTAATTT GTACAGAGGA ATTCTTAAAG ATAATCTTCG AAGCAGTAAG ATTAAAATCG
GGAAAATGGA TAAAGAATGT TATAAGTGAT ATTGAAGAAG ATGAATCTGA TAATAATTTA
ATTACAGTAT AA
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| Protein sequence | MKGFKNKEFL PTMIMMAVPI TIQSFITSSL NLVDNLMVGK LGEESIASVG LANQYIFIFT
LCILGINAGA SVFMSQFWGK KDLKNIKKVL GLDISIGLIV STLFALGSGF FSYEIMEILS
NDLNVIELGA KYLQIVSVSC IFTNFTQAYS SALRSTEQPS VPMYASIVGV LINAFLNWVF
IFGNLGFEPM GVNGAALATT IARLVEMIFI VSFVYFRKNK VASRLNELIS FDLNFVKIYF
RTSWSVIVNE IVWSLGMTAY SIAYARIGTN AVASMQIATT LNNMFMVLLI GLATASSIMI
GNKIGSNEEE IAREYAKDIA VIAVLVGFIL GILIWITAPL ALKPFNVSEG TYLDTVKVLR
IIGLFFTIRA FNMVMIVGVF RGGGDTTYSM LVQCGTIWLY AVPMAFLGAT VFSLPVYGVY
FLICTEEFLK IIFEAVRLKS GKWIKNVISD IEEDESDNNL ITV
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