Gene CPF_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2816 
SymbolmurC 
ID4201340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3076892 
End bp3078292 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content31% 
IMG OID638083683 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_697180 
Protein GI261876162 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATATAA GTAAAGGAGT TGATATCTTG TCTTTCGATT TATTAAAAGA TATTAATAAA 
AAAGTTCATT TCATAGGAAT TGGTGGAGTT AGTATGAGTG GCTTAGCTGC TGTATTACTT
AACGCTGGTT ACAAAGTTTC AGGATCTGAT TCAAAAGAAT CAGAAATTAC TAATAGATTA
AAAGAAGAAG GTGCAAAAAT ATACATAGGT CACAGTAAAG ATAATTTACA AGATGTTGAT
GTAGTTGTAT ATACTGCAGC AATACCTAGC GATAACCCTG AAATAATTAA GGCTAAAGAG
GATAATCTTA TTTTAATGGA CAGGGCTGAA TTTTTAGGAC AAATTATGAA AGGTCATAAG
TTCAATGTTG CTGTCGCTGG AACTCACGGA AAAACTACTA CTACTTCAAT GATTTCTCAT
GTTGCCCTTA GTGCAGATCT AGACCCTACA ATATTAGTTG GTGGAGATTT AGATATTATT
CATGGAAACT TTAGAGTTGG AAACAGTGAA TACTTTATAA CAGAAGCTTG TGAATATAAA
CAAAGTTTCT TAAGATTCTT CCCTTATGTT GGAATAATAT TAAACATAGA TGCAGACCAT
CTAGATTTTT ATAAGGACAT AAACCACATA AAAGATACAT TTAAACAATT CGTTAGACTT
ATACCTAATG ATGGATATAT CATAGGAAAT GCTGATGATG AAAAAGTTAT GGAAGTTCTT
GAAGTAGCTA AATGCAATGT ATTAACTTAT GGAATTAATA ATGGGGATAT ACAAGCTAGA
AATATAGAGT TTAATGAAAA AGGTTGTGCT ACTTTTGATG TATTTAGAAA TGAAGAAAAA
CTTCTTTCTC TTTCTTTAAA TGTACCTGGT ATGCATAATG TATCAAACTC ATTATCAGCT
GTATGTTTAG CAGAAATATT CAATATAAAC GCTGATGCAA TAGTATCAGG ACTTTCATCT
TTTGGAGGAG CTCATAAAAG ATTCGAATAT AAGGGTACTA AAAATGATAT AACTGTTATT
GATGATTACG CTCACCACCC TGTTGAAATA AAAGCTACTC TAAGCACAGC TAAAAAAATG
AATCACAATA AAATAGTTTG TGTATTCCAA CCACATACTT ACACAAGAAC AAAAACTCTA
TTCAATGATT TTGTTAAATG TTTTGATGAT TGTGATGAGC TTGTTTTAAT GGATATATAT
GCAGCTAGAG AAAAAGATTT AGGTGAAATA AATTCAGATC AATTAGGAGA TGCTATAAGA
TCTCATGGAG TTAAATGTAC AAATGTACAC TCTCATGAAG AAGCATTAGA ATATGTAAAT
GCTAACTTAT CAAAAGGTGA CTTACTTTTA ACAGTTGGAG CTGGTGATGT AGTTAAAGTT
GGTGAACTTT TTTTAAACTA A
 
Protein sequence
MYISKGVDIL SFDLLKDINK KVHFIGIGGV SMSGLAAVLL NAGYKVSGSD SKESEITNRL 
KEEGAKIYIG HSKDNLQDVD VVVYTAAIPS DNPEIIKAKE DNLILMDRAE FLGQIMKGHK
FNVAVAGTHG KTTTTSMISH VALSADLDPT ILVGGDLDII HGNFRVGNSE YFITEACEYK
QSFLRFFPYV GIILNIDADH LDFYKDINHI KDTFKQFVRL IPNDGYIIGN ADDEKVMEVL
EVAKCNVLTY GINNGDIQAR NIEFNEKGCA TFDVFRNEEK LLSLSLNVPG MHNVSNSLSA
VCLAEIFNIN ADAIVSGLSS FGGAHKRFEY KGTKNDITVI DDYAHHPVEI KATLSTAKKM
NHNKIVCVFQ PHTYTRTKTL FNDFVKCFDD CDELVLMDIY AAREKDLGEI NSDQLGDAIR
SHGVKCTNVH SHEEALEYVN ANLSKGDLLL TVGAGDVVKV GELFLN