Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2805 |
Symbol | spoVT |
ID | 4203454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 3063139 |
End bp | 3063687 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083673 |
Product | stage V sprulation protein T |
Protein accession | YP_697170 |
Protein GI | 110801373 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family [TIGR02851] stage V sporulation protein T |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTA CTGGAATAGT AAGACGTATT GATGATTTAG GTAGAGTTGT AATACCTAAG GAAATAAGAA GAACTTTAAG AATAAGAGAA GGGGATCCTT TAGAAATCTT TACTGATAGA GATGGTGGAG TAATATTAAA AAAATACTCA CCAATAGGGG AACTAACAGA TTTTTCAAAG GAATATGCTG AAGCTCTACA ACAATCTACA GGACACATAA TTCTGATATC AGATAATGAT GCATTTATAT CTGTAAGTGG AACTTCTAAA AAAGAGTTTT TAGAAAGAAA AATAAGTGAT GAGTTAGAAG ATATAATGGA TAAGAGAAAA TCAGTAGTAT TAAGTGCTAC TAATAAAAAC TTAATACCAA TCCATGGTGA TGATGATGAA AGTAAATATA GTGGGCAGGT TATAGCACCT ATATTAGCTG AGGGTGATGC TATAGGCTCT GTAGTTATAC TTTCTAAAGA AGGTAAAGCT TTAGGAGAGG TTGAACAAAA ACTAGCAGAA ACAGCAGCTG CATTCTTAGG CAAACAAATG GAACAATAA
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Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFTDR DGGVILKKYS PIGELTDFSK EYAEALQQST GHIILISDND AFISVSGTSK KEFLERKISD ELEDIMDKRK SVVLSATNKN LIPIHGDDDE SKYSGQVIAP ILAEGDAIGS VVILSKEGKA LGEVEQKLAE TAAAFLGKQM EQ
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