| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2781 |
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| Symbol | lysS |
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| ID | 4202360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3043495 |
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| End bp | 3045000 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083649 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_697153 |
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| Protein GI | 110800440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATG AGGAAATAAA TATTCACGAA GCAGAAGAAC AATTAAGTGA ACAAGAGATG
TTAAGAAGAC AAAAGCTTGC TGAATTACAA GAAGCTGGTA AGGACCCATT TGATGTATAC
AAGGTAGAGA GAACACACTC TTCTGCTGAT GTAAAAGATA ATTTTGAAGA GTTAGAAGGT
AAAGAAGTAA AAGTTGCTGG AAGACTTATG TCAAAAAGAG GTCAAGGTAA AGTAGTATTC
GCTGATTTAG CAGATTTACC AGGAAAAATT CAATTATTTA TTAAGATTGA TAACGTTGGA
GAGGAAGCTT TAAAGGAATT TAAAACTTTC GATTTAGGTG ACTGGGTTGC TGCAACTGGA
GAAGTATTTA AAACAAAAAT GGGTGAAGTT TCAGTAAAAG TAACTTCATT TGAATTAATC
TGTAAATCTT TAAAACCATT ACCAGAAAAA TGGCATGGTT TAAAAGACCC AGACTTAAGA
TACAGACAAA GAGAAGTTGA TATAATAACA AACCCAGAAG TTAAAGATAC TTTTATTAAG
AGATCACAAA TAGTAAAAGC AATAAGAGAA TTCTTAGATA ATAGAGGATT CTTAGAGGTT
GACACACCAA TTCTTTCACC AATAGCTGGT GGAGCTGCTG CTAGACCTTT CATAACTCAC
CACAATGCTT TAGATATAGA TATGTATTTA AGAATTGCTA CTGAGTTATA CTTAAAGAGA
TTAATAGTTG CTGGATTTGA AAAAGTTTAT GAAATGGGTA AAAACTTCAG AAATGAAGGG
GTTTCAGTAA GACATAATCC AGAATTCACT GCTATAGAGT TATATGAAGC ATATGCTGAT
TACAATGACA TGATGGAAAT CATGGAAAAC ATGATTGCTT ATGTTTGTGA AAAAGTAAAT
GGATCAACTA AAGTTACTTA TGAAGGAACT GAAATAGACT TCACACCACC ATGGAGAAGA
ATTACTATGG TTGATGCAGT TAAAGAATTT GCTGGTATAG ATTTCAACGA AATTAAGAGT
GATGAAGAAG CTCAAGCTAT AGCTAAAGAG AAAAACTTAG AATTCCCTAA ACCATTAGAT
AAGGTTACTA AAGGTGAAGT TCTAAATATG TTATTTGAAG AATATGGTGA AGATAAATTA
ATCCAACCTA CATTCTTAAT AGATTATCCA GTAGAGATAT CACCTCTTAC TAAAAAGAAA
AGAGGAAATG AAATGTTTAC TGAGAGATTT GAAGGATTTG TATATGGTAG AGAAGTATGT
AACGCATACT CAGAGCTTAA CGATCCAATA GTTCAAAGAG AAAGATTTGA ACAACAAGCT
AGAGAAAGAG AATACGGAGA TGATGAAGCA TACATGTTAG ATGAAGAATT CATGAGTGCT
TTAGAAACTG GTATGCCTCC AACAGGTGGA TTAGGAATAG GAATAGACAG AATGATAATG
TTCTTAACTG ACTCTTCATC AATAAGAGAC GTTATATTAT TCCCAACAAT GAAACCACAA
AAATAG
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| Protein sequence | MSNEEINIHE AEEQLSEQEM LRRQKLAELQ EAGKDPFDVY KVERTHSSAD VKDNFEELEG
KEVKVAGRLM SKRGQGKVVF ADLADLPGKI QLFIKIDNVG EEALKEFKTF DLGDWVAATG
EVFKTKMGEV SVKVTSFELI CKSLKPLPEK WHGLKDPDLR YRQREVDIIT NPEVKDTFIK
RSQIVKAIRE FLDNRGFLEV DTPILSPIAG GAAARPFITH HNALDIDMYL RIATELYLKR
LIVAGFEKVY EMGKNFRNEG VSVRHNPEFT AIELYEAYAD YNDMMEIMEN MIAYVCEKVN
GSTKVTYEGT EIDFTPPWRR ITMVDAVKEF AGIDFNEIKS DEEAQAIAKE KNLEFPKPLD
KVTKGEVLNM LFEEYGEDKL IQPTFLIDYP VEISPLTKKK RGNEMFTERF EGFVYGREVC
NAYSELNDPI VQRERFEQQA REREYGDDEA YMLDEEFMSA LETGMPPTGG LGIGIDRMIM
FLTDSSSIRD VILFPTMKPQ K
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