| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2739 |
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| Symbol | ispD |
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| ID | 4202885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3000499 |
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| End bp | 3001176 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083605 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_697118 |
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| Protein GI | 110800301 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAG TAGTTAGCGT AATATTAGCA GGTGGAAAAG GAAAAAGAAT GGGTGCTGAA
GTTAGTAAGC AATTCATTGA AATAAATGGT AAGCCTATAA TATATTATAC TTTAAAAGCT
TTTGAGGAGT GTAAAGGTAT TGATGAAATA ATTCTTGTTC TACCTAAGGA TGAAATAGAT
TATTTTAAAA GAGAAATAGA ACCTAGATTT GATTTTAAAA TATCTAAAAT TATTGAAGGT
GGAAAGGAAA GACAGGATTC AGTTTACAAT GCATTAAATT CCATAGGAGA TTGTGATATT
GTTTTAATAC ATGATGGAGC AAGAGCTTTT GTAAGCAATA AAATAATAGA AGACGGAATA
AAGTATTCTA GAGAGTTTGG AGCAGCAGCT CCAGGTGTTA TGCCAAAGGA CACTATAAAA
GTTAAAAATT TAGAAGGATT CTCTGTGGAT ACACCAAATA GAGCATCTTT AGTAGCTGTT
CAAACTCCAC AATGCTTTAA ATATAATTTA ATAAAAAAAG GTCATAACAA AGTTAAAAAT
GAAAAGATTC AAGTTACGGA TGATACTATG ATAGTAGAAC TTTTAGGAGA AAAAGTTTAT
CTTTTTGAAG GTGACTATAA AAACATAAAG GTTACAACAC CAGAAGACTT AATATTAGCA
GAACATTTTG TTAAGTAA
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| Protein sequence | MGKVVSVILA GGKGKRMGAE VSKQFIEING KPIIYYTLKA FEECKGIDEI ILVLPKDEID
YFKREIEPRF DFKISKIIEG GKERQDSVYN ALNSIGDCDI VLIHDGARAF VSNKIIEDGI
KYSREFGAAA PGVMPKDTIK VKNLEGFSVD TPNRASLVAV QTPQCFKYNL IKKGHNKVKN
EKIQVTDDTM IVELLGEKVY LFEGDYKNIK VTTPEDLILA EHFVK
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