Gene CPF_2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2733 
Symbol 
ID4203098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2994120 
End bp2994629 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content29% 
IMG OID638083599 
Producthypothetical protein 
Protein accessionYP_697112 
Protein GI110799360 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTA TATTTATAGA TGGTTATAAT GTTATAAATA GTTGGCCTAA TCTAAAAAAG 
TCAAAAAATT ATAGCTATGA TATAGCAAGA ACAGAGCTTA CAGAAATGCT TGAAAATTAT
GCTGCTTTTA ACTCTTGTAA AATTTATTTA GTTTTTGATG CTCATAAGGT TGCTGGAAAT
ATTGAAAGCA AAGAGTTATC TGGAAATATA ATTACTGTCT TTACAAAAGA AGGCGAAATT
GCTGATGCAT ATATTGAGAG AATGGTAGAT GAACTAGGAA GAAAAGTAGA AATTGTTGTT
GTAACCTCGG ATAGGTTAGA ACAACAAACT ATTTTCCAAA GAGGGGCCGT GAGAATGTCA
TCTATTGAAT TCTACAATGA AGTGTTAAAA GTTCAGGATA ACATTAGAAA AAAGGCAGAA
AAAAATAAAT TAGAATTAGG TAAAAATTTT TTAGGCGATA CTTTAGAAGA AAGTGTATTA
GAAAAATTAG AAAAAATGAG AAGAGGGTAA
 
Protein sequence
MRVIFIDGYN VINSWPNLKK SKNYSYDIAR TELTEMLENY AAFNSCKIYL VFDAHKVAGN 
IESKELSGNI ITVFTKEGEI ADAYIERMVD ELGRKVEIVV VTSDRLEQQT IFQRGAVRMS
SIEFYNEVLK VQDNIRKKAE KNKLELGKNF LGDTLEESVL EKLEKMRRG