Gene CPF_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2725 
SymbolrplA 
ID4201132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2989558 
End bp2990247 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content36% 
IMG OID638083591 
Product50S ribosomal protein L1 
Protein accessionYP_697105 
Protein GI110798795 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000462552 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA AATATATTGA AAGTTCAAAA TTAATAGATA AAAATGCATT ATATACTCCA 
GCAGAAGCTT TAGAGCTTGC TGTTAAAACT GCAAAAGCTA AATTCGATGA AACTATCGAA
TTACACGTAA GATTAGGTGT AGACCCAAGA CATGCTGACC AACAAGTTAG AGGAGCTGTT
GTTCTTCCAC ACGGAACTGG TAAAGATGTT AAAGTTTTAG TTTTCGCTAA AGGTGAGAAA
GCTAAAGAAG CTGAAGCTGC AGGAGCAGAT TTCGTTGGAG CTGACGAATT AGTACAAAAA
ATTCAAGGTG AAAACTGGTT TGATTATGAT GTAGTTGTTG CTACTCCAGA TATGATGGGT
GTAGTTGGTA GATTAGGTAG AGTATTAGGA CCAAAAGGTT TAATGCCAAA CCCAAAATCA
GGAACAGTTA CATTTGACGT AGCTAACGCT ATAAAAGAAA TCAAAGCAGG TAAAGTTGAA
TATAGAGTAG ATAAGACTGC TATAGTTCAC TGCCCAATAG GAAAGAAATC TTTCGGAACT
GAGAAATTAG TTGAAAACTT CAAAGCTTTA ATGGATGCTT TAGTAAAAGC TAAACCAGCT
GCTGCTAAAG GACAATACTT AAAATCAGTT TCAGTTTCAG CTACTATGGG ACCTGGAGCT
AAAGTTAACC CAGCTAAAGT TTTAGATTAA
 
Protein sequence
MGKKYIESSK LIDKNALYTP AEALELAVKT AKAKFDETIE LHVRLGVDPR HADQQVRGAV 
VLPHGTGKDV KVLVFAKGEK AKEAEAAGAD FVGADELVQK IQGENWFDYD VVVATPDMMG
VVGRLGRVLG PKGLMPNPKS GTVTFDVANA IKEIKAGKVE YRVDKTAIVH CPIGKKSFGT
EKLVENFKAL MDALVKAKPA AAKGQYLKSV SVSATMGPGA KVNPAKVLD