Gene CPF_2707 details

Gene Information

• Locus tag: CPF_2707
• Symbol: rplP
• ID: 4201383
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2970558
• End bp: 2970992
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638083573
• Product: 50S ribosomal protein L16
• Protein accession: YP_697087
• Protein GI: 110798970
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATGC CTAAAAGAGT TAAACATCGT AAGGTACAAC GTGGTAGAAT GAAAGGTAAG 
GCAACTAGAG GAAACTTTCT AGCTTACGGA GATTTCGGAA TCCAAGCTAC AACTTGTGGA 
TGGATCACTA GTAACCAAAT AGAAGCTGCG AGAATAGCTA TCAATAGATA TATAAGAAGA 
GGCGGAAAGC TTTGGATAAA AATATTCCCA GACAAACCTG TAACTGAGAA ACCAGCTGAA 
ACAAGAATGG GTTCAGGTAA AGGTTCAGTT GAATACTGGG TAGCAGTAGT TAAACCAGGT 
AGAGTTTTAT TCGAGTTATC TGGAGTTGAT GAAGAGAAAG CAAGAGAAGC TATGAGACTT 
GCTTCACACA AACTTCCTGT AAAGACTAAG TTCGTTACAA GAAGAGATTT TGAGGAAATG 
GGTGGTGAAG AATAA 

 

Protein sequence

MLMPKRVKHR KVQRGRMKGK ATRGNFLAYG DFGIQATTCG WITSNQIEAA RIAINRYIRR 
GGKLWIKIFP DKPVTEKPAE TRMGSGKGSV EYWVAVVKPG RVLFELSGVD EEKAREAMRL 
ASHKLPVKTK FVTRRDFEEM GGEE