| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2697 |
|---|
| Symbol | rpsE |
|---|
| ID | 4202375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2966596 |
|---|
| End bp | 2967093 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638083563 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_697077 |
|---|
| Protein GI | 110800455 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG ATCCTAGCAC ACTAGACCTT AAAGAAAAGG TTGTTAGTAT AAGCAGAGTT
ACTAAGGTTG TTAAGGGTGG TAGAAACTTC AGATTCAGTG CGTTAGTTGT TGTTGGAGAC
GAGAACGGAC ACGTTGGTGT TGGAACTGGT AAATCTATCG AAATCCCTGA AGCAATAAGA
AAAGGAATAG AAGATGCTAA GAAAAACTTA GTAGAAGTTT CAATCGTTGG AACTACTGTT
CCTCATGAAA TACACGGAAA ATTCGGTACA GGAGATGTAC TTATAATGCC AGCTACTGAA
GGTACAGGAG TTATAGCTGG AGGTCCTGCA AGATCAGTTC TTGAATTAGC AGGATTAAAG
GATGTTAGAG CTAAATCATT AGGTTCAAAC AACCCAAGAA ACATGGTAAA AGCAACTATC
AACGGATTAG CTAACTTAAG AACAGCTGAA GATATAGCTA AATTAAGAGG AAAATCTGTT
GAAGAGATAA TAGGTTAG
|
|---|
| Protein sequence | MRIDPSTLDL KEKVVSISRV TKVVKGGRNF RFSALVVVGD ENGHVGVGTG KSIEIPEAIR
KGIEDAKKNL VEVSIVGTTV PHEIHGKFGT GDVLIMPATE GTGVIAGGPA RSVLELAGLK
DVRAKSLGSN NPRNMVKATI NGLANLRTAE DIAKLRGKSV EEIIG
|
|---|
| |