| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2694 |
|---|
| Symbol | secY |
|---|
| ID | 4201269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2964657 |
|---|
| End bp | 2965934 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638083560 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_697074 |
|---|
| Protein GI | 110800847 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTATCAA CCCTACGTAA TGCCTGGAAG GTTCAAGATT TAAGAAAAAA AATAATTTGG
ACTGTATTCT TAATAGCAAT TTTCAGGATG GGAAGTTATA TTCCTGTTCC TGGAATTGAT
ACAGATAGTC TAAAAGCTTT AACACAATCA GGAAGCTTAG TAAGCTTCTA TGATTTAATT
TCTGGTGGTT CTTTTAGTAG ATTTAGTATA TTCGCTTTAG GTGTTGTACC ATACATCAAT
GCTTCAATCA TTATGCAACT TTTAACAGTT GCAATTCCTA AATTAGAACA ATTATCTAAA
GAGGGAGATG ATGGAAGAAA GAAAATCCAA AAGATAACTA GATATGCTTC AATTGTTATT
GGAGCAATCA CTGCTTATGG AAGTTATGTG ATAATTAACA ATGTTGGCGC ACTTAAGAGC
AATTCTCCAG TTAGTATGTT TTTAATATTA CTAACACTAG TAGTTGGATC AACTTTCTTA
ATGTGGTTAG GAGATCAAAT TACAGTTAAA GGAGTAGGAA ATGGTACTTC TTTGATAATA
TTTGCAAATA TATTATCAAG CTTACCAATG ACTGGTTATC AAATATATAA CTTAAGTAAG
ATAGGTAAAA TAAATGTTGT TGAAGTAGCA TTATTTATTT TCTTTACATT AGCTTTATTA
GCAGGTGTAA TTTACTTATC ATTAGCTGAA AGAAGAATTA CTGTACAATA TGCAGGTAAA
GCCGTAGGTA ATAAAATGAT GAAGGGACAA TCAACTCATA TTCCATTAAG TATTATTGGA
ACAACTGTTA TAGCAATAAT CTTTGCTATG TCTGTTATGA GTTTCCCAAC AACTATAGCT
CAATTCTTCC CAGAAGCTGG ATGGTCACAA TGGATTACAG GATCTTCTTA CAGTCCTTTC
AATGCAAAGA CTTGGATGTA TCCAGTATTA TATGCATTAC TGACTATATT CTTTACTTGG
TTCTATACTC AAATAACATT TAAGCCAGAT GAAATGGCTG AGAATATGCA TAAATCATCA
GGTTTCATTC CTGGAATAAG ACCTGGAAAA CCAACAGAGA TTTATTTAGA GAAAGTATTA
AATAGAATTT CAATGTTTGG TGGATGTTTT GCTGCTATTA TAGCAGTAGT TCCTATTTTA
GTTGCAAACT ATACTCCTTT CCAAGGAATA CAGTTTGGAG GAACATCACT GTTAATTCTA
GTTTCTGTTT CATTAGAGAT AATGAGACAA TTAGAATCTC AATTAACAAT GAGACATTAC
CAAGGATTCT TAAAATAG
|
|---|
| Protein sequence | MLSTLRNAWK VQDLRKKIIW TVFLIAIFRM GSYIPVPGID TDSLKALTQS GSLVSFYDLI
SGGSFSRFSI FALGVVPYIN ASIIMQLLTV AIPKLEQLSK EGDDGRKKIQ KITRYASIVI
GAITAYGSYV IINNVGALKS NSPVSMFLIL LTLVVGSTFL MWLGDQITVK GVGNGTSLII
FANILSSLPM TGYQIYNLSK IGKINVVEVA LFIFFTLALL AGVIYLSLAE RRITVQYAGK
AVGNKMMKGQ STHIPLSIIG TTVIAIIFAM SVMSFPTTIA QFFPEAGWSQ WITGSSYSPF
NAKTWMYPVL YALLTIFFTW FYTQITFKPD EMAENMHKSS GFIPGIRPGK PTEIYLEKVL
NRISMFGGCF AAIIAVVPIL VANYTPFQGI QFGGTSLLIL VSVSLEIMRQ LESQLTMRHY
QGFLK
|
|---|
| |