| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2686 |
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| Symbol | rpsD |
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| ID | 4201907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2960854 |
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| End bp | 2961474 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638083552 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_697066 |
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| Protein GI | 110801306 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATACTGGAGC TACATGTAAG TTATGTAGAA GAGAAGGTAT GAAATTATTC
CTAAAAGGGG ATAGATGTTA TACAGATAAA TGTGCTTTCG TTAGAAGAAG TTATGCACCA
GGACAACACG GAGCAAGCAG AAAGAAATTA TCTAACTACG GAACACAATT AAGAGAGAAG
CAAAAAGCTA AGAGAATATA CGGAGTTCTT GAAGGTCAGT TCAGAAACAC ATATGAAAGA
GCTGAAAAAA TGAGAGGAAT CGCCGGTGAA AACTTACTTA AATTATTAGA AATGAGATTA
GATAACGTTG TTTACAGATT AGGATATGGT GCTTCAAGAA CAGAAGCTAG ACAATTAGTA
AACCACGGTC ATTTCTTAGT AAATGGTAAA AAAGTTGATA TAGCATCATT CAAAGTATCA
GTTAACGATG TTATAACAGT TTGTGAAAAG AGCAGAGGAT CAGAAAGATT CAAAATGTTT
GCTGAAAATC CAAAAGCTTT ACCAAAATGG TTAGAAGCTA ACGTTGAAAA TTTCGAAGGT
AAAGTTGTTG CTGAGCCTGC AAGAGAAGAT ATCGACGTAC CAGTTAACGA GACTCTAATC
GTCGAGTTAT ACAGCAAATA A
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| Protein sequence | MARYTGATCK LCRREGMKLF LKGDRCYTDK CAFVRRSYAP GQHGASRKKL SNYGTQLREK
QKAKRIYGVL EGQFRNTYER AEKMRGIAGE NLLKLLEMRL DNVVYRLGYG ASRTEARQLV
NHGHFLVNGK KVDIASFKVS VNDVITVCEK SRGSERFKMF AENPKALPKW LEANVENFEG
KVVAEPARED IDVPVNETLI VELYSK
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