Gene CPF_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2678 
SymbolrpsI 
ID4201142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2954640 
End bp2955032 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content34% 
IMG OID638083544 
Product30S ribosomal protein S9 
Protein accessionYP_697058 
Protein GI110798864 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000125135 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG TTCAATACAT GGGAACTGGA AGAAGAAAGA AATCAGTTGC AAGAGTAAGA 
CTTGTACCAG GTGAAGGTAG AGTTATAGTA AATAATAGAG AAATCGAAAC ATATTTCGGA
TTAGAAACTT TAAGAGTTGT AGTTAACCAA CCATTAGTTT TAACTGAAAC TAAAGACAAA
TATGACGTTT TAGTTAACGT TCATGGTGGT GGATTATCAG GTCAAGCAGG AGCTATAAGA
CATGGTATAT CAAGAGCTTT ATTAAAAGCT GACGAAAACT TAAGACCAGA ATTAAAGAAA
GCTGGATTCT TAACTAGAGA CCCAAGAATG GTTGAAAGAA AGAAATGCGG TTTAAAGAAA
GCAAGAAGAT CTCCACAATT CTCAAAGAGA TAA
 
Protein sequence
MAKVQYMGTG RRKKSVARVR LVPGEGRVIV NNREIETYFG LETLRVVVNQ PLVLTETKDK 
YDVLVNVHGG GLSGQAGAIR HGISRALLKA DENLRPELKK AGFLTRDPRM VERKKCGLKK
ARRSPQFSKR